RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RXFP1Q9HBX9 757 aa17.06■□□□□ 0.32
SKA3-204ENST00000462482 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
SKA3-204ENST00000462482 MARCH5Q9NX47 278 aa17.06■□□□□ 0.32
SKA3-204ENST00000462482 IGSF9Q9P2J2 1179 aa17.06■□□□□ 0.32
SKA3-204ENST00000462482 GFRA3O60609 400 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 TADA2AO75478 443 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 RFX1P22670 979 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 AKAP5P24588 427 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 CLCN5P51795 746 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 NEK4P51957 841 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 DSG1Q02413 1049 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 GRIK3Q13003 919 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 USP41Q3LFD5 358 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 KIAA0319Q5VV43 1072 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 MAEAQ7L5Y9 396 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 TAS1R1Q7RTX1 841 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
SKA3-204ENST00000462482 FLCNQ8NFG4 579 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 PRIMPOLQ96LW4 560 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 NACC1Q96RE7 527 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 C2orf40Q9H1Z8 148 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 PLEKHA4Q9H4M7 779 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
SKA3-204ENST00000462482 ZMYM2Q9UBW7 1377 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 B4GALT5O43286 388 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 C1RP00736 705 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 MCM7P33993 719 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 AMHR2Q16671 573 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 FUT10Q6P4F1 479 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 GPR65Q8IYL9 337 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 SMG7Q92540 1137 aaKnown RBP17.04■□□□□ 0.32
SKA3-204ENST00000462482 MTMR9Q96QG7 549 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 RHOBTB2Q9BYZ6 727 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 KCNK12Q9HB15 430 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
SKA3-204ENST00000462482 MIOSQ9NXC5 875 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 ADAM28Q9UKQ2 775 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
SKA3-204ENST00000462482 C5orf42Q9H799 3197 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 SF3B1O75533 1304 aaKnown RBP eCLIP17.03■□□□□ 0.32
SKA3-204ENST00000462482 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 POTEMA6NI47 508 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 N4BP3O15049 544 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 JAK2O60674 1132 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
SKA3-204ENST00000462482 CDR2LQ86X02 465 aaPredicted RBP17.03■□□□□ 0.32
SKA3-204ENST00000462482 PALB2Q86YC2 1186 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 TMEM105Q8N8V8 129 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 RIN2Q8WYP3 895 aaPredicted RBP17.03■□□□□ 0.32
SKA3-204ENST00000462482 ADPGKQ9BRR6 497 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 KLK14Q9P0G3 267 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 FNIP2Q9P278 1114 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 DUSP12Q9UNI6 340 aa17.03■□□□□ 0.32
SKA3-204ENST00000462482 CLUHO75153 1309 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 STK25O00506 426 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 LARGE1O95461 756 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 MYBP10242 640 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.32
SKA3-204ENST00000462482 MAPK6Q16659 721 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 RNF168Q8IYW5 571 aaPredicted RBP17.02■□□□□ 0.32
SKA3-204ENST00000462482 NXPE3Q969Y0 559 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 RTP3Q9BQQ7 232 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 GPRC5CQ9NQ84 441 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 ZDHHC7Q9NXF8 308 aa17.02■□□□□ 0.32
SKA3-204ENST00000462482 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.32
SKA3-204ENST00000462482 A0A087WWV3 80 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 SPATA31D3P0C874 917 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 LIG1P18858 919 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
SKA3-204ENST00000462482 TUSC3Q13454 348 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
SKA3-204ENST00000462482 PPP2R5AQ15172 486 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 HAUS3Q68CZ6 603 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 SPATA31D4Q6ZUB0 917 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
SKA3-204ENST00000462482 CATSPER3Q86XQ3 398 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 GLYCTKQ8IVS8 523 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 SIX5Q8N196 739 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 DEPTORQ8TB45 409 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 C8orf76Q96K31 380 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 POLR3CQ9BUI4 534 aaPredicted RBP17.01■□□□□ 0.31
SKA3-204ENST00000462482 GPR62Q9BZJ7 368 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
SKA3-204ENST00000462482 F8W810 466 aa17■□□□□ 0.31
SKA3-204ENST00000462482 TGM5O43548 720 aa17■□□□□ 0.31
SKA3-204ENST00000462482 RFPL2O75678 378 aa17■□□□□ 0.31
SKA3-204ENST00000462482 EFEMP2O95967 443 aa17■□□□□ 0.31
SKA3-204ENST00000462482 THP07101 528 aa17■□□□□ 0.31
SKA3-204ENST00000462482 OR52Z1P0C646 297 aa17■□□□□ 0.31
SKA3-204ENST00000462482 SPATA31C1P0DKV0 1188 aa17■□□□□ 0.31
SKA3-204ENST00000462482 GUCY1B3Q02153 619 aa17■□□□□ 0.31
SKA3-204ENST00000462482 ELAVL2Q12926 359 aaKnown RBP17■□□□□ 0.31
SKA3-204ENST00000462482 FAM187BQ17R55 369 aa17■□□□□ 0.31
SKA3-204ENST00000462482 LIN9Q5TKA1 542 aa17■□□□□ 0.31
SKA3-204ENST00000462482 CDCA2Q69YH5 1023 aaPredicted RBP17■□□□□ 0.31
SKA3-204ENST00000462482 PDXDC1Q6P996 788 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms