RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PTPAQ15257 358 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 C1orf186Q6ZWK4 172 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 DDX53Q86TM3 631 aaKnown RBP16.95■□□□□ 0.3
VARS-219ENST00000461328 ADHFE1Q8IWW8 467 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 SYT2Q8N9I0 419 aaPredicted RBP16.95■□□□□ 0.3
VARS-219ENST00000461328 BCL7CQ8WUZ0 217 aaPredicted RBP16.95■□□□□ 0.3
VARS-219ENST00000461328 ZFP42Q96MM3 310 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 USP28Q96RU2 1077 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 POP1Q99575 1024 aaKnown RBP16.95■□□□□ 0.3
VARS-219ENST00000461328 ADPGKQ9BRR6 497 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 FZD8Q9H461 694 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 KMT5AQ9NQR1 393 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 FAN1Q9Y2M0 1017 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 GIT1Q9Y2X7 761 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 MUC3AQ02505 3323 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 PHLPP2Q6ZVD8 1323 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
VARS-219ENST00000461328 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
VARS-219ENST00000461328 CTSAP10619 480 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 AKAP5P24588 427 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 GUCY2CP25092 1073 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 NPTX2P47972 431 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 SCNN1GP51170 649 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 SLC12A3P55017 1021 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 STK38Q15208 465 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 FAM187BQ17R55 369 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 KHSRPQ92945 711 aaKnown RBP eCLIP16.94■□□□□ 0.3
VARS-219ENST00000461328 ZNF396Q96N95 335 aaPredicted RBP16.94■□□□□ 0.3
VARS-219ENST00000461328 C1QTNF1Q9BXJ1 281 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 CCDC113Q9H0I3 377 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 ZBP1Q9H171 429 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 EPHX3Q9H6B9 360 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 STK39Q9UEW8 545 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 PARP2Q9UGN5 583 aa16.94■□□□□ 0.3
VARS-219ENST00000461328 FBXO2Q9UK22 296 aaPredicted RBP16.94■□□□□ 0.3
VARS-219ENST00000461328 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
VARS-219ENST00000461328 K7ERI5 159 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 ACKR2O00590 384 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 NRP1O14786 923 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 INPPL1O15357 1258 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 NR1I2O75469 434 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
VARS-219ENST00000461328 OR1G1P47890 313 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
VARS-219ENST00000461328 GIT2Q14161 759 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 FOXD4L6Q3SYB3 417 aaPredicted RBP16.93■□□□□ 0.3
VARS-219ENST00000461328 ANKRD54Q6NXT1 300 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 FOXD4L3Q6VB84 417 aaPredicted RBP16.93■□□□□ 0.3
VARS-219ENST00000461328 TMEM184AQ6ZMB5 413 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 APBB1IPQ7Z5R6 666 aaPredicted RBP16.93■□□□□ 0.3
VARS-219ENST00000461328 COLGALT2Q8IYK4 626 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 DAW1Q8N136 415 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 AUTS2Q8WXX7 1259 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 CASP10Q92851 521 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 RPS6KC1Q96S38 1066 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 PDZD7Q9H5P4 517 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 KLK14Q9P0G3 267 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 USP20Q9Y2K6 914 aa16.93■□□□□ 0.3
VARS-219ENST00000461328 USP15Q9Y4E8 981 aaPredicted RBP16.93■□□□□ 0.3
VARS-219ENST00000461328 SRPRBQ9Y5M8 271 aaKnown RBP16.93■□□□□ 0.3
VARS-219ENST00000461328 NPHP3-ACAD11A0A0J9YXS1 232 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 TTLL13PA6NNM8 815 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 SFI1A8K8P3 1242 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 CLASP2O75122 1294 aaKnown RBP16.92■□□□□ 0.3
VARS-219ENST00000461328 SMTNP53814 917 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 MAPK7Q13164 816 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 KCNC3Q14003 757 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 MCM6Q14566 821 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 ATF7IP2Q5U623 682 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 KRI1Q8N9T8 703 aaKnown RBP16.92■□□□□ 0.3
VARS-219ENST00000461328 RAD54LQ92698 747 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 EPSTI1Q96J88 318 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 CLIC6Q96NY7 704 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 APOL5Q9BWW9 433 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 VN1R3Q9BXE9 311 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 CCSER1Q9C0I3 900 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 C17orf75Q9HAS0 396 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 MIOSQ9NXC5 875 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 HCFC2Q9Y5Z7 792 aa16.92■□□□□ 0.3
VARS-219ENST00000461328 ZMYM2Q9UBW7 1377 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 C19orf67A6NJJ6 358 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 SLC16A4O15374 487 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 TBCAO75347 108 aaKnown RBP16.91■□□□□ 0.3
VARS-219ENST00000461328 FAM13AO94988 1023 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 F13A1P00488 732 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 ZSCAN22P10073 491 aaPredicted RBP16.91■□□□□ 0.3
VARS-219ENST00000461328 PLS3P13797 630 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 HOXB8P17481 243 aaPredicted RBP16.91■□□□□ 0.3
VARS-219ENST00000461328 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
VARS-219ENST00000461328 DSC1Q08554 894 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 SLC39A14Q15043 492 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 DCAF4L1Q3SXM0 396 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 USP49Q70CQ1 688 aa16.91■□□□□ 0.3
VARS-219ENST00000461328 LARP4BQ92615 738 aaKnown RBP16.91■□□□□ 0.3
VARS-219ENST00000461328 MRPL4Q9BYD3 311 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms