RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 CEP89Q96ST8 783 aa16.3■□□□□ 0.2
NCK1-202ENST00000460960 CHST12Q9NRB3 414 aa16.3■□□□□ 0.2
NCK1-202ENST00000460960 FAM105AQ9NUU6 356 aa16.3■□□□□ 0.2
NCK1-202ENST00000460960 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
NCK1-202ENST00000460960 IRAK3Q9Y616 596 aa16.3■□□□□ 0.2
NCK1-202ENST00000460960 CARNS1A5YM72 827 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 C2CD2LO14523 706 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 MYBP10242 640 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 NPEPPSP55786 919 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 ERMP1Q7Z2K6 904 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 DTWD2Q8NBA8 298 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 LRRC15Q8TF66 581 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
NCK1-202ENST00000460960 RTP3Q9BQQ7 232 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 KCNK12Q9HB15 430 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 SUCLA2Q9P2R7 463 aaPredicted RBP16.29■□□□□ 0.2
NCK1-202ENST00000460960 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 DUSP12Q9UNI6 340 aa16.29■□□□□ 0.2
NCK1-202ENST00000460960 OFD1O75665 1012 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 CFHP08603 1231 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 NPR3P17342 541 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 GBP2P32456 591 aaPredicted RBP16.28■□□□□ 0.2
NCK1-202ENST00000460960 CDC42EP1Q00587 391 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 TARBP2Q15633 366 aaKnown RBP16.28■□□□□ 0.2
NCK1-202ENST00000460960 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
NCK1-202ENST00000460960 ZNF280BQ86YH2 543 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 PIGOQ8TEQ8 1089 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 KLHL5Q96PQ7 755 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 VN1R3Q9BXE9 311 aa16.28■□□□□ 0.2
NCK1-202ENST00000460960 INO80BQ9C086 356 aaPredicted RBP16.28■□□□□ 0.2
NCK1-202ENST00000460960 NARSO43776 548 aaKnown RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 CNPP09543 421 aaKnown RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 PDIA4P13667 645 aaKnown RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 RAB27AP51159 221 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 CLCN4P51793 760 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 PDIA5Q14554 519 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 XKR3Q5GH77 459 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 KCNK18Q7Z418 384 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 KSR1Q8IVT5 923 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 C4orf19Q8IY42 314 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 RSPH1Q8WYR4 309 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 PGBD4Q96DM1 585 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 PNMA5Q96PV4 448 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 PLIN2Q99541 437 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 HINFPQ9BQA5 517 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 POLR3CQ9BUI4 534 aaPredicted RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 NIFKQ9BYG3 293 aaKnown RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 CSRNP2Q9H175 543 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 ZSWIM4Q9H7M6 989 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 MAN1C1Q9NR34 630 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 MRPL17Q9NRX2 175 aaKnown RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
NCK1-202ENST00000460960 CA14Q9ULX7 337 aa16.27■□□□□ 0.2
NCK1-202ENST00000460960 VPS13AQ96RL7 3174 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 B4GALT3O60512 393 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 BMP15O95972 392 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 URODP06132 367 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 RPA1P27694 616 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 YWHABP31946 246 aaKnown RBP16.26■□□□□ 0.19
NCK1-202ENST00000460960 STK38Q15208 465 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 ZNF410Q86VK4 478 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 RSAD2Q8WXG1 361 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 RIN2Q8WYP3 895 aaPredicted RBP16.26■□□□□ 0.19
NCK1-202ENST00000460960 EPSTI1Q96J88 318 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 TUFT1Q9NNX1 390 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 FAN1Q9Y2M0 1017 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 PRG3Q9Y2Y8 225 aaPredicted RBP16.26■□□□□ 0.19
NCK1-202ENST00000460960 PCDHB2Q9Y5E7 798 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 GVINP1Q7Z2Y8 2422 aa16.26■□□□□ 0.19
NCK1-202ENST00000460960 SPTLC2O15270 562 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 DDHD2O94830 711 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 LYPLA2O95372 231 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 POMCP01189 267 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 ALDH2P05091 517 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
NCK1-202ENST00000460960 TRAIPQ9BWF2 469 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 RSAD1Q9HA92 442 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 GDPD2Q9HCC8 539 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
NCK1-202ENST00000460960 IGSF9Q9P2J2 1179 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 SRPRBQ9Y5M8 271 aaKnown RBP16.25■□□□□ 0.19
NCK1-202ENST00000460960 R4GN57 208 aa16.25■□□□□ 0.19
NCK1-202ENST00000460960 CCDC195A0A1B0GUA6 201 aa16.24■□□□□ 0.19
NCK1-202ENST00000460960 E9PMD0 336 aa16.24■□□□□ 0.19
NCK1-202ENST00000460960 YEATS4O95619 227 aa16.24■□□□□ 0.19
NCK1-202ENST00000460960 KARSQ15046 597 aaKnown RBP16.24■□□□□ 0.19
NCK1-202ENST00000460960 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
NCK1-202ENST00000460960 ELMSAN1Q6PJG2 1045 aa16.24■□□□□ 0.19
NCK1-202ENST00000460960 AGMOQ6ZNB7 445 aa16.24■□□□□ 0.19
NCK1-202ENST00000460960 C15orf39Q6ZRI6 1047 aa16.24■□□□□ 0.19
NCK1-202ENST00000460960 ERMNQ8TAM6 284 aa16.24■□□□□ 0.19
NCK1-202ENST00000460960 STAMQ92783 540 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms