RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 GPRIN1Q7Z2K8 1008 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 CMTR2Q8IYT2 770 aaKnown RBP3.84□□□□□ -1.79
SYPL1-203ENST00000460770 LILRA3Q8N6C8 439 aaPredicted RBP3.84□□□□□ -1.79
SYPL1-203ENST00000460770 SMC1BQ8NDV3 1235 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 APPBP2Q92624 585 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 TFAP2CQ92754 450 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 NINJ1Q92982 152 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 WDR11Q9BZH6 1224 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 H2AFY2Q9P0M6 372 aaPredicted RBP3.84□□□□□ -1.79
SYPL1-203ENST00000460770 RNF181Q9P0P0 153 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 PLAAQ9Y263 795 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 CHST2Q9Y4C5 530 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 FPGT-TNNI3KV9GXZ4 949 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 PHF2O75151 1096 aa3.83□□□□□ -1.8
SYPL1-203ENST00000460770 ZSCAN20P17040 1043 aaPredicted RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 ELLP55199 621 aaPredicted RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 RNASE9P60153 205 aaKnown RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 UBE3CQ15386 1083 aa3.83□□□□□ -1.8
SYPL1-203ENST00000460770 ZBTB41Q5SVQ8 909 aa3.83□□□□□ -1.8
SYPL1-203ENST00000460770 NXPE1Q8N323 547 aa3.83□□□□□ -1.8
SYPL1-203ENST00000460770 CPEB3Q8NE35 698 aaKnown RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 GPR101Q96P66 508 aaPredicted RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 FDXACB1Q9BRP7 624 aaPredicted RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 ZNF768Q9H5H4 540 aaKnown RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 ANKFY1Q9P2R3 1169 aa3.83□□□□□ -1.8
SYPL1-203ENST00000460770 PRSS50Q9UI38 385 aa3.83□□□□□ -1.8
SYPL1-203ENST00000460770 NOC2LQ9Y3T9 749 aaKnown RBP3.83□□□□□ -1.8
SYPL1-203ENST00000460770 TNFRSF18Q9Y5U5 241 aa3.83□□□□□ -1.8
SYPL1-203ENST00000460770 COL4A3Q01955 1670 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 PRSS38A1L453 326 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 PIPSLA2A3N6 862 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 TBKBP1A7MCY6 615 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 ZNF891A8MT65 544 aaPredicted RBP3.82□□□□□ -1.8
SYPL1-203ENST00000460770 KDM1AO60341 852 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 FOSP01100 380 aaPredicted RBP3.82□□□□□ -1.8
SYPL1-203ENST00000460770 CXCR5P32302 372 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 CRHR1P34998 444 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 ATXN1P54253 815 aaKnown RBP3.82□□□□□ -1.8
SYPL1-203ENST00000460770 C21orf58P58505 322 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 TERF2Q15554 542 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 BMT2Q1RMZ1 405 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 RD3Q7Z3Z2 195 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 XYLT1Q86Y38 959 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 NIM1KQ8IY84 436 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 MSL3Q8N5Y2 521 aaKnown RBP3.82□□□□□ -1.8
SYPL1-203ENST00000460770 CAGE1Q8TC20 777 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 ZNF480Q8WV37 535 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 SNX33Q8WV41 574 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 FEZ1Q99689 392 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 ATP11BQ9Y2G3 1177 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 COX11Q9Y6N1 276 aa3.82□□□□□ -1.8
SYPL1-203ENST00000460770 SPATA31A6Q5VVP1 1343 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 RPTORQ8N122 1335 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 LEFTY2O00292 366 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 PJA2O43164 708 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 TGM5O43548 720 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 LPXNO60711 386 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 ITGA10O75578 1167 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 CFBP00751 764 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 SNRPA1P09661 255 aaKnown RBP3.81□□□□□ -1.8
SYPL1-203ENST00000460770 SEC24CP53992 1094 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 MANFP55145 182 aaKnown RBP3.81□□□□□ -1.8
SYPL1-203ENST00000460770 FAM189BP81408 668 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 MPP3Q13368 585 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 CSRP2Q16527 193 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 HDGFL2Q7Z4V5 671 aaPredicted RBP3.81□□□□□ -1.8
SYPL1-203ENST00000460770 RASSF3Q86WH2 238 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 LINC00476Q8WZB0 136 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 UBXN4Q92575 508 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 RAX2Q96IS3 184 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 ANO3Q9BYT9 981 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 SYBUQ9NX95 663 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 GPRC5DQ9NZD1 345 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 CD2APQ9Y5K6 639 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 PPP2R3BQ9Y5P8 575 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 NOX1Q9Y5S8 564 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 CDY2AQ9Y6F7 541 aa3.81□□□□□ -1.8
SYPL1-203ENST00000460770 CDKL5O76039 1030 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 FKBP9O95302 570 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 ESRRBO95718 433 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 C1RP00736 705 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 ZFP36P26651 326 aaKnown RBP3.8□□□□□ -1.8
SYPL1-203ENST00000460770 FLT3LGP49771 235 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 CCDC144BQ3MJ40 725 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 PRR16Q569H4 304 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 RRP12Q5JTH9 1297 aaKnown RBP3.8□□□□□ -1.8
SYPL1-203ENST00000460770 ZKSCAN2Q63HK3 967 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 FKBP9P1Q75LS8 142 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 SLC5A5Q92911 643 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 MFSD3Q96ES6 412 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 DRC1Q96MC2 740 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 ACAP3Q96P50 834 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 BBC3Q96PG8 261 aaPredicted RBP3.8□□□□□ -1.8
SYPL1-203ENST00000460770 MTFR1LQ9H019 292 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 SYNPO2LQ9H987 977 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 RSAD1Q9HA92 442 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 SPTLC3Q9NUV7 552 aa3.8□□□□□ -1.8
SYPL1-203ENST00000460770 TESQ9UGI8 421 aaKnown RBP3.8□□□□□ -1.8
SYPL1-203ENST00000460770 EVLQ9UI08 416 aaPredicted RBP3.8□□□□□ -1.8
SYPL1-203ENST00000460770 USP15Q9Y4E8 981 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms