RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 KCNG4Q8TDN1 519 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 LARP4BQ92615 738 aaKnown RBP16.44■□□□□ 0.22
ATG4B-213ENST00000460211 FBXL18Q96ME1 805 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 NTPCRQ9BSD7 190 aaKnown RBP16.44■□□□□ 0.22
ATG4B-213ENST00000460211 APOL6Q9BWW8 343 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 TBC1D13Q9NVG8 400 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 PARP2Q9UGN5 583 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 LZTS1Q9Y250 596 aa16.44■□□□□ 0.22
ATG4B-213ENST00000460211 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 SLC16A4O15374 487 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 ZC3H11AO75152 810 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 TBCAO75347 108 aaKnown RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 FAM13AO94988 1023 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 SCP2P22307 547 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 IRS1P35568 1242 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 LTBRP36941 435 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 BCAR1P56945 870 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 NHLH1Q02575 133 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 DLX2Q07687 328 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 DCAF4L1Q3SXM0 396 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 FOXD4L6Q3SYB3 417 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 ATF7IP2Q5U623 682 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 FOXD4L3Q6VB84 417 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 USP49Q70CQ1 688 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 CDR2LQ86X02 465 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 ADHFE1Q8IWW8 467 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 MRPS27Q92552 414 aaKnown RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 TMEM169Q96HH4 297 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 MRPL4Q9BYD3 311 aaKnown RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 PDZD7Q9H5P4 517 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 IGFLR1Q9H665 355 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 NRDE2Q9H7Z3 1164 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 TLR9Q9NR96 1032 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 BLOC1S4Q9NUP1 217 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 ARHGAP28Q9P2N2 729 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 PRKAG3Q9UGI9 489 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 HES2Q9Y543 173 aa16.43■□□□□ 0.22
ATG4B-213ENST00000460211 FNDC1Q4ZHG4 1894 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-213ENST00000460211 NPHP3-ACAD11A0A0J9YXS1 232 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 ARL5CA6NH57 179 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 C19orf67A6NJJ6 358 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 CUTAO60888 179 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 NR1I2O75469 434 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 POMCP01189 267 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 ALDH2P05091 517 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 GTF2F1P35269 517 aaKnown RBP eCLIP16.42■□□□□ 0.22
ATG4B-213ENST00000460211 HYAL1Q12794 435 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 COL19A1Q14993 1142 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 HFE2Q6ZVN8 426 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 SV2BQ7L1I2 683 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 MYCT1Q8N699 235 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 RPS6KC1Q96S38 1066 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 GAD1Q99259 594 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 TMEM175Q9BSA9 504 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
ATG4B-213ENST00000460211 ZHX3Q9H4I2 956 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 PARVGQ9HBI0 331 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 STK39Q9UEW8 545 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 TNFSF13BQ9Y275 285 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
ATG4B-213ENST00000460211 ZMYM2Q9UBW7 1377 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 GALTP07902 379 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 AKAP5P24588 427 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 ABCD1P33897 745 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 PBX3P40426 434 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 MLH1P40692 756 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 STAT6P42226 847 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-213ENST00000460211 PKP1Q13835 747 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 GIT2Q14161 759 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 NGRNQ9NPE2 291 aaKnown RBP16.41■□□□□ 0.22
ATG4B-213ENST00000460211 MUTYHQ9UIF7 546 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 TRIOO75962 3097 aa16.41■□□□□ 0.22
ATG4B-213ENST00000460211 INPPL1O15357 1258 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 LINC01565O15544 149 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 MBTPS2O43462 519 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 DNAJB1P25685 340 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 ME1P48163 572 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 CAMK1Q14012 370 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 NT5DC1Q5TFE4 455 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 TMC7Q7Z402 723 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 TMEM161BQ8NDZ6 487 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 ACO2Q99798 780 aaKnown RBP16.4■□□□□ 0.22
ATG4B-213ENST00000460211 PANK2Q9BZ23 570 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 LRRC27Q9C0I9 530 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 ENTPD7Q9NQZ7 604 aa16.4■□□□□ 0.22
ATG4B-213ENST00000460211 FSD2A1L4K1 749 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 TTLL13PA6NNM8 815 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 NT5C1B-RDH14C9J2C7 533 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 TRAK2O60296 914 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 TBX10O75333 385 aa16.39■□□□□ 0.21
ATG4B-213ENST00000460211 BRD1O95696 1058 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms