RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TBX20Q9UMR3 447 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 EXOC7Q9UPT5 735 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 H0YCG3 227 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 EXOC3O60645 756 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 RGS2P41220 211 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 KLK7P49862 253 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 ZBED6P86452 979 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 NOGQ13253 232 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 PLCB4Q15147 1175 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 TARBP2Q15633 366 aaKnown RBP11.24□□□□□ -0.61
HERC4-207ENST00000460168 DUSP28Q4G0W2 176 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 FAM186BQ8IYM0 893 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 SOCS4Q8WXH5 440 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
HERC4-207ENST00000460168 HVCN1Q96D96 273 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 PANX2Q96RD6 677 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 NUP58Q9BVL2 599 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
HERC4-207ENST00000460168 TTC26A0AVF1 554 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 LRRIQ4A6NIV6 560 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 TISP43B9A030 160 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 STX10O60499 249 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 MAFO75444 373 aaPredicted RBP11.23□□□□□ -0.61
HERC4-207ENST00000460168 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 LGALS2P05162 132 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 HOXC6P09630 235 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 SMPD1P17405 629 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 KRT9P35527 623 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 PPP2R3AQ06190 1150 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 CCDC155Q8N6L0 562 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 RETREG2Q8NC44 543 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 KCNN1Q92952 543 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 MKNK1Q9BUB5 465 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 MMRN2Q9H8L6 949 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 SUGCTQ9HAC7 445 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 FAM207AQ9NSI2 230 aaPredicted RBP11.23□□□□□ -0.61
HERC4-207ENST00000460168 ABHD10Q9NUJ1 306 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 ITM2BQ9Y287 266 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 ADGRA3Q8IWK6 1321 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 HNRNPDLO14979 420 aaKnown RBP11.23□□□□□ -0.61
HERC4-207ENST00000460168 ARHGAP6O43182 974 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 HBP1O60381 514 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 ABL2P42684 1182 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 TNFAIP2Q03169 654 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 CCL14Q16627 93 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
HERC4-207ENST00000460168 PREPLQ4J6C6 727 aaPredicted RBP11.23□□□□□ -0.61
HERC4-207ENST00000460168 PRAMEF19Q5SWL8 479 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 IQSEC1Q6DN90 963 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 LRRC31Q6UY01 552 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 RDH13Q8NBN7 331 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 CCDC51Q96ER9 411 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 APBA2Q99767 749 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 PCIF1Q9H4Z3 704 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 FLRT1Q9NZU1 646 aa11.23□□□□□ -0.61
HERC4-207ENST00000460168 BARX2Q9UMQ3 279 aaPredicted RBP11.23□□□□□ -0.61
HERC4-207ENST00000460168 RPS6KA5O75582 802 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 KRT38O76015 456 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 AFPP02771 609 aaKnown RBP11.22□□□□□ -0.61
HERC4-207ENST00000460168 ZNF286BP0CG31 522 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 GLRA2P23416 452 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 CNGA1P29973 690 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 ARL2P36404 184 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 NAMPTP43490 491 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 SNRPFP62306 86 aaKnown RBP11.22□□□□□ -0.61
HERC4-207ENST00000460168 TMEM139Q8IV31 216 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 DEPTORQ8TB45 409 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 IQCDQ96DY2 449 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 CBWD1Q9BRT8 395 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 NAA15Q9BXJ9 866 aaKnown RBP11.22□□□□□ -0.61
HERC4-207ENST00000460168 RNPEPQ9H4A4 650 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 DMAC2Q9NW81 257 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 ARHGAP28Q9P2N2 729 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
HERC4-207ENST00000460168 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 SIK3Q9Y2K2 1263 aa11.22□□□□□ -0.61
HERC4-207ENST00000460168 CFAP69A5D8W1 941 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.61
HERC4-207ENST00000460168 GAS2O43903 313 aaKnown RBP11.21□□□□□ -0.61
HERC4-207ENST00000460168 RTN3O95197 1032 aaPredicted RBP11.21□□□□□ -0.61
HERC4-207ENST00000460168 KCNJ6P48051 423 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 STRN3Q13033 797 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 DEFB115Q30KQ5 88 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 USP6NLQ92738 828 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 SLC35C1Q96A29 364 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 FAM81BQ96LP2 452 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 JPH2Q9BR39 696 aaPredicted RBP11.21□□□□□ -0.61
HERC4-207ENST00000460168 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 AGPAT5Q9NUQ2 364 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 HSPBP1Q9NZL4 362 aa11.21□□□□□ -0.61
HERC4-207ENST00000460168 ANKRD62A6NC57 917 aa11.21□□□□□ -0.62
HERC4-207ENST00000460168 ZBTB42B2RXF5 422 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms