RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 CYP39A1Q9NYL5 469 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 TCEAL9Q9UHQ7 104 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 DNAJC12Q9UKB3 198 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 NENFQ9UMX5 172 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 USP20Q9Y2K6 914 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 HGSO14964 777 aaPredicted RBP13.38□□□□□ -0.27
LINC00959-201ENST00000456581 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 PPP2R2AP63151 447 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
LINC00959-201ENST00000456581 CUL1Q13616 776 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 NIPA1Q7RTP0 329 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 TEX2Q8IWB9 1127 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 ODF2LQ9ULJ1 636 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 WDR81Q562E7 1941 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 TCRBV7S2A1N4TA0A589 114 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 GOLGA8IPA6NC78 632 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 GOLGA8JA6NMD2 632 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 DDX3YO15523 660 aaKnown RBP13.37□□□□□ -0.27
LINC00959-201ENST00000456581 EXOC3O60645 756 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 SP2Q02086 613 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 IFFO1Q0D2I5 559 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 SWT1Q5T5J6 900 aaKnown RBP13.37□□□□□ -0.27
LINC00959-201ENST00000456581 HS2ST1Q7LGA3 356 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 ZDHHC14Q8IZN3 488 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 SEC16BQ96JE7 1060 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 EPB41L4BQ9H329 900 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 GINM1Q9NU53 330 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 RNF181Q9P0P0 153 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 GABBR1Q9UBS5 961 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 RASSF9O75901 435 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 KRT13P13646 458 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 PSMC2P35998 433 aaKnown RBP13.37□□□□□ -0.27
LINC00959-201ENST00000456581 SWSAP1Q6NVH7 229 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 SLFN11Q7Z7L1 901 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 SELENOSQ9BQE4 189 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 CXorf56Q9H5V9 222 aa13.37□□□□□ -0.27
LINC00959-201ENST00000456581 WDR64B1ANS9 1081 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 CCND2P30279 289 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 PRKCIP41743 596 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 POU5F1Q01860 360 aaKnown RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 NLRX1Q86UT6 975 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 FBXO25Q8TCJ0 367 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 KAT5Q92993 513 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 CCDC114Q96M63 670 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 SCLT1Q96NL6 688 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 DMAC2Q9NW81 257 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 AMFRQ9UKV5 643 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 SBF1O95248 1867 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 GOLGA6L7A0A1B0GV03 622 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 C19orf81C9J6K1 198 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 ANKRD63C9JTQ0 380 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 CALCAP01258 141 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 CREB1P16220 341 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 KCNA2P16389 499 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 FGFR4P22455 802 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 CDC25CP30307 473 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 STAT1P42224 750 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 IFNAR2P48551 515 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 PSMC5P62195 406 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 HAUS6Q7Z4H7 955 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 NSUN6Q8TEA1 469 aaKnown RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 MYCBPQ99417 103 aaPredicted RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 FMO2Q99518 471 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 METTL14Q9HCE5 456 aaKnown RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 MLXIPLQ9NP71 852 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 BTBD7Q9P203 1132 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 LARSQ9P2J5 1176 aaKnown RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 SUCLA2Q9P2R7 463 aaPredicted RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 SEL1LQ9UBV2 794 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 UTP11Q9Y3A2 253 aaKnown RBP13.36□□□□□ -0.27
LINC00959-201ENST00000456581 DNAH12Q6ZR08 3092 aa13.36□□□□□ -0.27
LINC00959-201ENST00000456581 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 BTNL10A8MVZ5 291 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 FOXN3O00409 490 aaPredicted RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 IRF6O14896 467 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 SLC16A3O15427 465 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 MUTP22033 750 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 MAP2K2P36507 400 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 GSCP56915 257 aaPredicted RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 DR1Q01658 176 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 EMC10Q5UCC4 262 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms