RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ARF4P18085 180 aaPredicted RBP13.26□□□□□ -0.29
LMCD1-206ENST00000456506 AXLP30530 894 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 ARL2P36404 184 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 SCRN1Q12765 414 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 CAPSQ13938 189 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 PCBP1Q15365 356 aaKnown RBP eCLIP13.26□□□□□ -0.29
LMCD1-206ENST00000456506 OTOGLQ3ZCN5 2332 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 EXOC8Q8IYI6 725 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 GPR65Q8IYL9 337 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 ADSSL1Q8N142 457 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 ASAP3Q8TDY4 903 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 CCDC51Q96ER9 411 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 CPB2Q96IY4 423 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 HSD17B14Q9BPX1 270 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 NXF3Q9H4D5 531 aaKnown RBP13.26□□□□□ -0.29
LMCD1-206ENST00000456506 ZMYM2Q9UBW7 1377 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 SSX2IPQ9Y2D8 614 aa13.26□□□□□ -0.29
LMCD1-206ENST00000456506 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 TGM5O43548 720 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 REC8O95072 547 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 LYPLA2O95372 231 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 SPATA31D3P0C874 917 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 MYBP10242 640 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 OR1G1P47890 313 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 STK3Q13188 491 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 HTR4Q13639 388 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 CTTNQ14247 550 aaKnown RBP13.25□□□□□ -0.29
LMCD1-206ENST00000456506 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 SPATA31D4Q6ZUB0 917 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 MTRQ99707 1265 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 PAAF1Q9BRP4 392 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 NT5C3AQ9H0P0 336 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 GIT1Q9Y2X7 761 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 CYP46A1Q9Y6A2 500 aa13.25□□□□□ -0.29
LMCD1-206ENST00000456506 MYH11P35749 1972 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 CCDC194A0A1B0GVG4 234 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 WNT7AO00755 349 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 CPLX1O14810 134 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 B4GALT5O43286 388 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 CCNT1O60563 726 aaKnown RBP13.24□□□□□ -0.29
LMCD1-206ENST00000456506 ERLIN2O94905 339 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 SRFP11831 508 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 LAMP2P13473 410 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 GLRA2P23416 452 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 CYP4A11Q02928 519 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
LMCD1-206ENST00000456506 NAB2Q15742 525 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 RTP2Q5QGT7 225 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 NCAPH2Q6IBW4 605 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 FUT10Q6P4F1 479 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 NOTUMQ6P988 496 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 OTUD6AQ7L8S5 288 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 ERMP1Q7Z2K6 904 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 PALB2Q86YC2 1186 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 GPR152Q8TDT2 470 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 SMG7Q92540 1137 aaKnown RBP13.24□□□□□ -0.29
LMCD1-206ENST00000456506 NXPE3Q969Y0 559 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 PRKD2Q9BZL6 878 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
LMCD1-206ENST00000456506 PLEKHA4Q9H4M7 779 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 SLC2A4RGQ9NR83 387 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 ZDHHC7Q9NXF8 308 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 FBXL21Q9UKT6 434 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 CA14Q9ULX7 337 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 ANK1P16157 1881 aa13.24□□□□□ -0.29
LMCD1-206ENST00000456506 A0A1B0GUA9 196 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
LMCD1-206ENST00000456506 GLULP15104 373 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 RPL17P18621 184 aaKnown RBP13.23□□□□□ -0.29
LMCD1-206ENST00000456506 AKAP5P24588 427 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
LMCD1-206ENST00000456506 PHLDB3Q6NSJ2 640 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 CDR2LQ86X02 465 aaPredicted RBP13.23□□□□□ -0.29
LMCD1-206ENST00000456506 RABGGTAQ92696 567 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 STAMQ92783 540 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 COLEC11Q9BWP8 271 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 CXCL16Q9H2A7 254 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 TBC1D17Q9HA65 648 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 DPP7Q9UHL4 492 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 FBXW11Q9UKB1 542 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
LMCD1-206ENST00000456506 EP300Q09472 2414 aaPredicted RBP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 TTLL13PA6NNM8 815 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 INO80B-WBP1J3KQ70 363 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 PTGESO14684 152 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 ZMYND10O75800 440 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 ID4P47928 161 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 RARRES1P49788 294 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 GRIK3Q13003 919 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 NR5A1Q13285 461 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms