RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RPS6P62753 249 aaKnown RBP13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 CLDN10P78369 228 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 CDR2Q01850 454 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 SNRNP35Q16560 246 aaKnown RBP13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 MICALCLQ6ZW33 695 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 MIGA2Q7L4E1 593 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 TADA2BQ86TJ2 420 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 JAMLQ86YT9 394 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 PRELID2Q8N945 189 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 RDH13Q8NBN7 331 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 DDX1Q92499 740 aaKnown RBP13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 MOV10L1Q9BXT6 1211 aaKnown RBP13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 CTTNBP2NLQ9P2B4 639 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 FAM169AQ9Y6X4 670 aa13.48□□□□□ -0.25
ECHDC1-209ENST00000454591 EP400Q96L91 3159 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 KIAA1217Q5T5P2 1943 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 PHIPQ8WWQ0 1821 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 C5orf60A6NFR6 353 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 TISP43B9A030 160 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 NDUFAB1O14561 156 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 SLC16A4O15374 487 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 ZBED4O75132 1171 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 LRRN2O75325 713 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 STAM2O75886 525 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 SGPL1O95470 568 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 NPTX2P47972 431 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 PEX3P56589 373 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 GCNT1Q02742 428 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 DHX9Q08211 1270 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 SEL1L2Q5TEA6 688 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 NAA35Q5VZE5 725 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 ZDHHC24Q6UX98 284 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 ARMC9Q7Z3E5 817 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 VSIG10LQ86VR7 867 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 FBXL13Q8NEE6 735 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 PGM2Q96G03 612 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 CELF4Q9BZC1 486 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 EPB41L4BQ9H329 900 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 PABPC3Q9H361 631 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 CNOT10Q9H9A5 744 aaKnown RBP13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 AVENQ9NQS1 362 aaPredicted RBP13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 TMEM51Q9NW97 253 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 GRHL1Q9NZI5 618 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 ADAMTS5Q9UNA0 930 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
ECHDC1-209ENST00000454591 COL11A1P12107 1806 aaPredicted RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 ANKRD63C9JTQ0 380 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 GRIN3BO60391 1043 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 COMTP21964 271 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 RPS12P25398 132 aaKnown RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 CNGA1P29973 690 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 CCND2P30279 289 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 ATP1A2P50993 1020 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 CXCL9Q07325 125 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 CYP24A1Q07973 514 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 DRP2Q13474 957 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 SIX1Q15475 284 aaPredicted RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 BRDTQ58F21 947 aaPredicted RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 XKR9Q5GH70 373 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 C15orf39Q6ZRI6 1047 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 CYFIP1Q7L576 1253 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 HOOK3Q86VS8 718 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 NLRP14Q86W24 1093 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 MCPH1Q8NEM0 835 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 REPS2Q8NFH8 660 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 MYCBPAPQ8TBZ2 947 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 ZNF473Q8WTR7 871 aaKnown RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 SEMA4DQ92854 862 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 C12orf42Q96LP6 360 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 NT5C1BQ96P26 610 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 TRIM51Q9BSJ1 452 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 PLEKHA4Q9H4M7 779 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 LRRC19Q9H756 370 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 KIAA1586Q9HCI6 787 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 MYOZ2Q9NPC6 264 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 ZNF277Q9NRM2 450 aaPredicted RBP13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 TCEAL9Q9UHQ7 104 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 SAMM50Q9Y512 469 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 PCDHA10Q9Y5I2 948 aa13.46□□□□□ -0.25
ECHDC1-209ENST00000454591 FSCN2O14926 492 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ATP9AO75110 1047 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 CYP11B1P15538 503 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 GUCY1A3Q02108 690 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 DMP1Q13316 513 aaPredicted RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 BYSLQ13895 437 aaKnown RBP13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 ZNF568Q3ZCX4 644 aa13.45□□□□□ -0.26
ECHDC1-209ENST00000454591 CIAPIN1Q6FI81 312 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms