RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 SAFBQ15424 915 aaKnown RBP eCLIP6.32□□□□□ -1.4
CUL3-208ENST00000454323 COBLL1Q53SF7 1204 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 FRMD7Q6ZUT3 714 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 CHST15Q7LFX5 561 aaPredicted RBP6.32□□□□□ -1.4
CUL3-208ENST00000454323 PTRH1Q86Y79 214 aaKnown RBP6.32□□□□□ -1.4
CUL3-208ENST00000454323 AMOTL1Q8IY63 956 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 SH3RF2Q8TEC5 729 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 JADE3Q92613 823 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 TTC17Q96AE7 1141 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 LRGUKQ96M69 825 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 STRBPQ96SI9 672 aaKnown RBP6.32□□□□□ -1.4
CUL3-208ENST00000454323 NMRK2Q9NPI5 230 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 ACSS2Q9NR19 701 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 C1orf112Q9NSG2 853 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 CCM2LQ9NUG4 571 aaPredicted RBP6.32□□□□□ -1.4
CUL3-208ENST00000454323 TAGLN3Q9UI15 199 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 B3GALT1Q9Y5Z6 326 aa6.32□□□□□ -1.4
CUL3-208ENST00000454323 ZCCHC6Q5VYS8 1495 aaKnown RBP6.32□□□□□ -1.4
CUL3-208ENST00000454323 DCAF1Q9Y4B6 1507 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 KCNK3O14649 394 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 NKRFO15226 690 aaKnown RBP eCLIP6.31□□□□□ -1.4
CUL3-208ENST00000454323 COL6A2P12110 1019 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 GJA4P35212 333 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 KCNQ1P51787 676 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 KIF11P52732 1056 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 EIF4HQ15056 248 aaKnown RBP6.31□□□□□ -1.4
CUL3-208ENST00000454323 RTKN2Q8IZC4 609 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 FAM43AQ8N2R8 423 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 CFHR4Q92496 578 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 E2F7Q96AV8 911 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 TAAR9Q96RI9 348 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 SLC39A2Q9NP94 309 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 PTGFRNQ9P2B2 879 aa6.31□□□□□ -1.4
CUL3-208ENST00000454323 LCHNA4D1U4 455 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 SLC26A4O43511 780 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 CLASP2O75122 1294 aaKnown RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 CYP17A1P05093 508 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 PTX3P26022 381 aaPredicted RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 ZNF280AP59817 542 aaPredicted RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 MOGSQ13724 837 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 CNGB1Q14028 1251 aaPredicted RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 RRP1BQ14684 758 aaKnown RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 NOLC1Q14978 699 aaKnown RBP eCLIP6.3□□□□□ -1.4
CUL3-208ENST00000454323 ESRP1Q6NXG1 681 aaKnown RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 CC2D1AQ6P1N0 951 aaPredicted RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 OTOP2Q7RTS6 562 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 RBM12BQ8IXT5 1001 aaKnown RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 SHCBP1Q8NEM2 672 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 SSH1Q8WYL5 1049 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 ACAP3Q96P50 834 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 PCIF1Q9H4Z3 704 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 ZNF277Q9NRM2 450 aaPredicted RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 SAP30BPQ9UHR5 308 aaKnown RBP6.3□□□□□ -1.4
CUL3-208ENST00000454323 SRPK3Q9UPE1 567 aa6.3□□□□□ -1.4
CUL3-208ENST00000454323 KDM1AO60341 852 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 HIP1RO75146 1068 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 NUDT3O95989 172 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 GCP02774 474 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 CD40P25942 277 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 MTNR1BP49286 362 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 USP14P54578 494 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 FSTL1Q12841 308 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 ACAP2Q15057 778 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 CLUL1Q15846 466 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 FIGNQ5HY92 759 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 ATAT1Q5SQI0 421 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 IFIT1BQ5T764 474 aaKnown RBP6.29□□□□□ -1.4
CUL3-208ENST00000454323 SYCE2Q6PIF2 218 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 EP400NLQ6ZTU2 488 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 C11orf96Q7Z7L8 435 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 ZZZ3Q8IYH5 903 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 LPPQ93052 612 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 ZNF496Q96IT1 587 aaPredicted RBP6.29□□□□□ -1.4
CUL3-208ENST00000454323 ELAC2Q9BQ52 826 aaKnown RBP6.29□□□□□ -1.4
CUL3-208ENST00000454323 UBA5Q9GZZ9 404 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 INCENPQ9NQS7 918 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 DNM3Q9UQ16 869 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 TELO2Q9Y4R8 837 aa6.29□□□□□ -1.4
CUL3-208ENST00000454323 ATAD2BQ9ULI0 1458 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 BAZ1AQ9NRL2 1556 aaPredicted RBP6.28□□□□□ -1.4
CUL3-208ENST00000454323 PDS5BQ9NTI5 1447 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 ACOT7O00154 380 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 SCDO00767 359 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 AP1G1O43747 822 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 CTNND1O60716 968 aaKnown RBP6.28□□□□□ -1.4
CUL3-208ENST00000454323 KRT4P19013 534 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 AGXTP21549 392 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 PTGS1P23219 599 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 PAX3P23760 479 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 SERPINB3P29508 390 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 ADKP55263 362 aaKnown RBP6.28□□□□□ -1.4
CUL3-208ENST00000454323 SEC23AQ15436 765 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 ZRSR2Q15696 482 aaKnown RBP6.28□□□□□ -1.4
CUL3-208ENST00000454323 FSCN1Q16658 493 aaKnown RBP6.28□□□□□ -1.4
CUL3-208ENST00000454323 BTBD8Q5XKL5 378 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 TOGARAM2Q6ZUX3 1019 aa6.28□□□□□ -1.4
CUL3-208ENST00000454323 FAM9AQ8IZU1 332 aaPredicted RBP6.28□□□□□ -1.4
CUL3-208ENST00000454323 SYNE4Q8N205 404 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms