RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 AGO3Q9H9G7 860 aaKnown RBP9.59□□□□□ -0.87
COL28A1-205ENST00000453441 OLFML3Q9NRN5 406 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 AGPAT5Q9NUQ2 364 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 ARHGAP28Q9P2N2 729 aa9.59□□□□□ -0.87
COL28A1-205ENST00000453441 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
COL28A1-205ENST00000453441 CNTNAP2Q9UHC6 1331 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 DENND3A2RUS2 1198 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 K7ERI5 159 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 ACKR2O00590 384 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 TRAK2O60296 914 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 STAG3L1P0CL83 205 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 ACRP10323 421 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 WNT7BP56706 349 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 LONRF3Q496Y0 759 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 NOTUMQ6P988 496 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 Q6ZNB5 142 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 UNC13DQ70J99 1090 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 C16orf59Q7L2K0 433 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 DYMQ7RTS9 669 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 FAM178BQ8IXR5 827 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 HACE1Q8IYU2 909 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 ENGASEQ8NFI3 743 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 BSNDQ8WZ55 320 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 DNAJC19Q96DA6 116 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 VWCEQ96DN2 955 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 PAGE5Q96GU1 130 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 RNPC3Q96LT9 517 aaKnown RBP9.58□□□□□ -0.88
COL28A1-205ENST00000453441 PPP1R16BQ96T49 567 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 CCDC113Q9H0I3 377 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 FZD8Q9H461 694 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 GOLPH3LQ9H4A5 285 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 ELAC1Q9H777 363 aaKnown RBP9.58□□□□□ -0.88
COL28A1-205ENST00000453441 RGS18Q9NS28 235 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 PANK4Q9NVE7 773 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 SERTAD1Q9UHV2 236 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 EXOC7Q9UPT5 735 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 SLC4A7Q9Y6M7 1214 aa9.58□□□□□ -0.88
COL28A1-205ENST00000453441 UBE4BO95155 1302 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 TTC3P53804 2025 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 ZBBXA8MT70 800 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 K7ENM7 598 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 N4BP3O15049 544 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 TSPAN1O60635 241 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 KIF20AO95235 890 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 PRKCBP05771 671 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 IDEP14735 1019 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 EPHB4P54760 987 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 WDR5P61964 334 aaKnown RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 ASIC1P78348 528 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 RAD51AP2Q09MP3 1159 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 PSMD2Q13200 908 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 PRPF4BQ13523 1007 aaKnown RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 SNW1Q13573 536 aaKnown RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 DSC3Q14574 896 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 HERC4Q5GLZ8 1057 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 PTCRAQ6ISU1 281 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 ZPBP2Q6X784 338 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 SLC24A5Q71RS6 500 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 OTOP2Q7RTS6 562 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 NPAS4Q8IUM7 802 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 TMEM161BQ8NDZ6 487 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 MRPL4Q9BYD3 311 aaKnown RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 ZHX3Q9H4I2 956 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 RMND1Q9NWS8 449 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 PIN4Q9Y237 131 aaKnown RBP9.57□□□□□ -0.88
COL28A1-205ENST00000453441 ZMYM2Q9UBW7 1377 aa9.57□□□□□ -0.88
COL28A1-205ENST00000453441 COL4A6Q14031 1691 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 NPHP3-ACAD11A0A0J9YXS1 232 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 A0A0U1RQF3 1178 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
COL28A1-205ENST00000453441 A0A1B0GUA9 196 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
COL28A1-205ENST00000453441 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 SFI1A8K8P3 1242 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 ENPP3O14638 875 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 SLC16A4O15374 487 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 ZNF623O75123 536 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 SMC2O95347 1197 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 EOMESO95936 686 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 MBD3O95983 291 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 PIGRP01833 764 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 AFMP43652 599 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 SARSP49591 514 aaKnown RBP9.56□□□□□ -0.88
COL28A1-205ENST00000453441 SNRPFP62306 86 aaKnown RBP9.56□□□□□ -0.88
COL28A1-205ENST00000453441 FAM189BP81408 668 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 GTF2BQ00403 316 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 HSP90AA2PQ14568 343 aaPredicted RBP9.56□□□□□ -0.88
COL28A1-205ENST00000453441 KCNB1Q14721 858 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 POSTNQ15063 836 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 SHHQ15465 462 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 RAB30Q15771 203 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 KYAT1Q16773 422 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 DCAF4L1Q3SXM0 396 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 LRIT3Q3SXY7 679 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
COL28A1-205ENST00000453441 TWF2Q6IBS0 349 aaKnown RBP9.56□□□□□ -0.88
COL28A1-205ENST00000453441 SLC27A1Q6PCB7 646 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms