RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 LILRA6Q6PI73 481 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 DCLRE1AQ6PJP8 1040 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 DGLUCYQ7Z3D6 616 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 FEZF2Q8TBJ5 459 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 GPR152Q8TDT2 470 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 MTRQ99707 1265 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 LXNQ9BS40 222 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 OSBPL6Q9BZF3 934 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 TRIM6Q9C030 488 aaPredicted RBP15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 ZSWIM4Q9H7M6 989 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 CA14Q9ULX7 337 aa15.92■□□□□ 0.14
LYSMD3-202ENST00000453259 EML1O00423 815 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 TGM5O43548 720 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 ZMYND10O75800 440 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 REC8O95072 547 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 POU2F2P09086 479 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 GRIK3Q13003 919 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 NPY5RQ15761 445 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 FUT10Q6P4F1 479 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 PDXDC1Q6P996 788 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 RSPO2Q6UXX9 243 aaPredicted RBP15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 MTSS1LQ765P7 747 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 CENPQQ7L2Z9 268 aaPredicted RBP15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 RTL10Q7L3V2 364 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 NEK8Q86SG6 692 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 SLFN12Q8IYM2 578 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 GPR161Q8N6U8 529 aaKnown RBP15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 PJA1Q8NG27 643 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 RSAD2Q8WXG1 361 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 TMEM143Q96AN5 459 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 ZNF274Q96GC6 653 aaPredicted RBP15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 GAD1Q99259 594 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 SLKQ9H2G2 1235 aaPredicted RBP15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 ADAM28Q9UKQ2 775 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 FBXO4Q9UKT5 387 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 DOCK8Q8NF50 2099 aa15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.14
LYSMD3-202ENST00000453259 MTCL1Q9Y4B5 1905 aaKnown RBP15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 CCDC194A0A1B0GVG4 234 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 SPTLC1O15269 473 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 SLC37A4O43826 429 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 CDKL5O76039 1030 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 SP9P0CG40 484 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 XBP1P17861 261 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 SCNN1GP51170 649 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 CCT2P78371 535 aaKnown RBP15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 PRKCQQ04759 706 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 INF2Q27J81 1249 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 TAS1R1Q7RTX1 841 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 RMDN1Q96DB5 314 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 NCOA5Q9HCD5 579 aaKnown RBP15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 DLL3Q9NYJ7 618 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 FANCMQ8IYD8 2048 aa15.9■□□□□ 0.14
LYSMD3-202ENST00000453259 WDR87Q6ZQQ6 2873 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 DMXL1Q9Y485 3027 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 INO80B-WBP1J3KQ70 363 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 KINO60870 393 aaKnown RBP15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 DGAT1O75907 488 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 LYPLA2O95372 231 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 FSHRP23945 695 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 PFKPQ01813 784 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 ELAVL2Q12926 359 aaKnown RBP15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 XKR9Q5GH70 373 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 SLC27A1Q6PCB7 646 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 RUFY3Q7L099 469 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 GET4Q7L5D6 327 aaPredicted RBP15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 PRIMPOLQ96LW4 560 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 ZFP42Q96MM3 310 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 DDX23Q9BUQ8 820 aaKnown RBP15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 EIF2AQ9BY44 585 aaKnown RBP15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 BCO2Q9BYV7 579 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 FBXW11Q9UKB1 542 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 CDH7Q9ULB5 785 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 NUMBLQ9Y6R0 609 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 R4GN57 208 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 OTOGLQ3ZCN5 2332 aa15.89■□□□□ 0.13
LYSMD3-202ENST00000453259 TDRD15B5MCY1 1934 aaKnown RBP15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 XYLBO75191 536 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 MBTD1Q05BQ5 628 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 LIN9Q5TKA1 542 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 PALB2Q86YC2 1186 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 KIAA2013Q8IYS2 634 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 RIN2Q8WYP3 895 aaPredicted RBP15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 GPR62Q9BZJ7 368 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 ANKEF1Q9NU02 776 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 WRAP73Q9P2S5 460 aaPredicted RBP15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 PCDHGA2Q9Y5H1 932 aa15.88■□□□□ 0.13
LYSMD3-202ENST00000453259 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 A0A1B0GUA9 196 aa15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 KANSL1LA0AUZ9 987 aa15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 MARCH6O60337 910 aa15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 TADA2AO75478 443 aa15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 DCNP07585 359 aaKnown RBP15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 ARF4P18085 180 aaPredicted RBP15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 SPIRE1Q08AE8 756 aa15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 TUSC3Q13454 348 aa15.87■□□□□ 0.13
LYSMD3-202ENST00000453259 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms