RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PCCAP05165 728 aaPredicted RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 POTEIP0CG38 1075 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 VARSP26640 1264 aaKnown RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 DSG1Q02413 1049 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 PRPF4BQ13523 1007 aaKnown RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 USH1GQ495M9 461 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 CCDC174Q6PII3 467 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 POTEEQ6S8J3 1075 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 ADAT2Q7Z6V5 191 aaKnown RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 NT5DC3Q86UY8 548 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 SCUBE1Q8IWY4 988 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 RSPH1Q8WYR4 309 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 IP6K1Q92551 441 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 HPS3Q969F9 1004 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 NMD3Q96D46 503 aaKnown RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 AGAP3Q96P47 875 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 CADM1Q9BY67 442 aaKnown RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 CCSER1Q9C0I3 900 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 ZBTB3Q9H5J0 574 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 ARMCX3Q9UH62 379 aaPredicted RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 RTCBQ9Y3I0 505 aaKnown RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 MAFBQ9Y5Q3 323 aaPredicted RBP9.21□□□□□ -0.93
LSM5-208ENST00000450169 TIAM2Q8IVF5 1701 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 RGPD5Q99666 1765 aa9.21□□□□□ -0.93
LSM5-208ENST00000450169 C5P01031 1676 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 SMIM31A0A1B0GVY4 71 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 PLEKHA8P1O95397 391 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 ASMTLO95671 621 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 TATP17735 454 aaPredicted RBP9.21□□□□□ -0.94
LSM5-208ENST00000450169 FOXN2P32314 431 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 RGS2P41220 211 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 MCAMP43121 646 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 RPL21P46778 160 aaKnown RBP9.21□□□□□ -0.94
LSM5-208ENST00000450169 GPSM2P81274 684 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 PTK2Q05397 1052 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 MOGSQ13724 837 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 TAF1BQ53T94 588 aaPredicted RBP9.21□□□□□ -0.94
LSM5-208ENST00000450169 PHLDB3Q6NSJ2 640 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 IZUMO2Q6UXV1 221 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 PPP1R21Q6ZMI0 780 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 UNC13DQ70J99 1090 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 LRP10Q7Z4F1 713 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 DNAJC1Q96KC8 554 aaKnown RBP9.21□□□□□ -0.94
LSM5-208ENST00000450169 FAM81BQ96LP2 452 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 ERVK-5Q9HDB9 667 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 NLRP2Q9NX02 1062 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 ARHGEF38Q9NXL2 777 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.21□□□□□ -0.94
LSM5-208ENST00000450169 ARFGEF2Q9Y6D5 1785 aa9.21□□□□□ -0.94
LSM5-208ENST00000450169 TRIM43BA6NCK2 446 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 FOXO6A8MYZ6 492 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 BTBD19C9JJ37 291 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 CCDC22O60826 627 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 GCP02774 474 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 BCRP11274 1271 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 KRT13P13646 458 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 PLCG1P19174 1290 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 POLD1P28340 1107 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 PSMD7P51665 324 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 IL9RQ01113 521 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 LRRC63Q05C16 580 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 SYDE2Q5VT97 1194 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 LRRC55Q6ZSA7 311 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■■■□ 24
LSM5-208ENST00000450169 LRRC59Q96AG4 307 aaKnown RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 MPHOSPH6Q99547 160 aaKnown RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 C7orf25Q9BPX7 421 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 SIKE1Q9BRV8 207 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 INIPQ9NRY2 104 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 CLIC5Q9NZA1 410 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 NAGPAQ9UK23 515 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 PHTF1Q9UMS5 762 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 WASF2Q9Y6W5 498 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 STRCQ7RTU9 1775 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 OPHN1O60890 802 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 FDX1P10109 184 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 PDE6AP16499 860 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 GSTM4Q03013 218 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 PPP2R5CQ13362 524 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 CYLC2Q14093 348 aaPredicted RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 RRP1BQ14684 758 aaKnown RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 MEX3CQ5U5Q3 659 aaKnown RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 ALKBH5Q6P6C2 394 aaKnown RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 ZNF790Q6PG37 636 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 TRMT10CQ7L0Y3 403 aaKnown RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 SATL1Q86VE3 508 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 CCDC25Q86WR0 208 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 DNAAF5Q86Y56 855 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 SLC15A3Q8IY34 581 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 CTNNBL1Q8WYA6 563 aaPredicted RBP9.2□□□□□ -0.94
LSM5-208ENST00000450169 KCNN1Q92952 543 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 MAML3Q96JK9 1138 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 ECSITQ9BQ95 431 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 TMEM60Q9H2L4 133 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 SAR1AQ9NR31 198 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 TMOD4Q9NZQ9 345 aa9.2□□□□□ -0.94
LSM5-208ENST00000450169 NDUFA13Q9P0J0 144 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms