RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ZNF707Q96C28 371 aaPredicted RBP8.3□□□□□ -1.08
RBM39-218ENST00000449489 MXRA8Q9BRK3 442 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 IER2Q9BTL4 223 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 VN1R3Q9BXE9 311 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 NRDE2Q9H7Z3 1164 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 PSTPIP2Q9H939 334 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 RXFP1Q9HBX9 757 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 LTB4R2Q9NPC1 389 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 MAN1C1Q9NR34 630 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 ZDHHC7Q9NXF8 308 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 RAB23Q9ULC3 237 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 CEP131Q9UPN4 1083 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 NUMBLQ9Y6R0 609 aa8.3□□□□□ -1.08
RBM39-218ENST00000449489 MYO18BQ8IUG5 2567 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 TM4SF5O14894 197 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 GLUD1P00367 558 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 VTNP04004 478 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 SOD2P04179 222 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 TDGF1P13385 188 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 DARSP14868 501 aaKnown RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 ATP4AP20648 1035 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 TMOD1P28289 359 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 PHKA2P46019 1235 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 PDE1AP54750 535 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 NLRP11P59045 1033 aaKnown RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 CDC42EP1Q00587 391 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 NOMO2Q5JPE7 1267 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 GLB1LQ6UWU2 654 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 MTSS1LQ765P7 747 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 RNF169Q8NCN4 708 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 BCL7CQ8WUZ0 217 aaPredicted RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 SMG7Q92540 1137 aaKnown RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 RRP36Q96EU6 259 aaKnown RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 RPS6KC1Q96S38 1066 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 OCSTAMPQ9BR26 566 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 LZTS2Q9BRK4 669 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 TMEM175Q9BSA9 504 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 NT5C3AQ9H0P0 336 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 SEMA4GQ9NTN9 838 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 TBC1D13Q9NVG8 400 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.29□□□□□ -1.08
RBM39-218ENST00000449489 ACACAQ13085 2346 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 WDR81Q562E7 1941 aa8.29□□□□□ -1.08
RBM39-218ENST00000449489 MEIS1O00470 390 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 TEX28O15482 410 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 OFD1O75665 1012 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 EFEMP2O95967 443 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 ALDH2P05091 517 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 VARSP26640 1264 aaKnown RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 CNR2P34972 360 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 SLC11A1P49279 550 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 ITGB3BPQ13352 177 aaPredicted RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 FZD5Q13467 585 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 SNW1Q13573 536 aaKnown RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 PPP2R5DQ14738 602 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 UBXN2BQ14CS0 331 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 CEP55Q53EZ4 464 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 N4BP2L1Q5TBK1 243 aaPredicted RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 PRR23CQ6ZRP0 262 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 NIPA1Q7RTP0 329 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 CCDC60Q8IWA6 550 aaPredicted RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 RNF168Q8IYW5 571 aaPredicted RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 METTL13Q8N6R0 699 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 FGF14Q92915 247 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 PHKBQ93100 1093 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 MAP7D2Q96T17 732 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 MYL10Q9BUA6 226 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 AGO4Q9HCK5 861 aaKnown RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 ZNF302Q9NR11 478 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 PKD2L1Q9P0L9 805 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 SEC63Q9UGP8 760 aaKnown RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 PCDHA6Q9UN73 950 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 MRPS17Q9Y2R5 130 aaKnown RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 MTF2Q9Y483 593 aaPredicted RBP8.28□□□□□ -1.08
RBM39-218ENST00000449489 PCDHA8Q9Y5H6 950 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 GREB1Q4ZG55 1949 aa8.28□□□□□ -1.08
RBM39-218ENST00000449489 SPTA1P02549 2419 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 TMEM8BA6NDV4 472 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 BACH1O14867 736 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 RFPL2O75678 378 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 CCNE2O96020 404 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 URODP06132 367 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 SDSP20132 328 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 RAB27AP51159 221 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 GPC3P51654 580 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 RNASELQ05823 741 aaKnown RBP8.27□□□□□ -1.09
RBM39-218ENST00000449489 ADCY1Q08828 1119 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 IL31Q6EBC2 164 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 MIS18BP1Q6P0N0 1132 aa8.27□□□□□ -1.09
RBM39-218ENST00000449489 LILRA6Q6PI73 481 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms