RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SEZ6Q53EL9 994 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 FAM26DQ5JW98 314 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 NOTUMQ6P988 496 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 TRAF7Q6Q0C0 670 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 FILIP1Q7Z7B0 1213 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 GPD1LQ8N335 351 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 ADPGKQ9BRR6 497 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 FAM213AQ9BRX8 229 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 CDT1Q9H211 546 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 HIPK3Q9H422 1215 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 AGO3Q9H9G7 860 aaKnown RBP15.96■□□□□ 0.15
TNF-208ENST00000449264 TAB2Q9NYJ8 693 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 ST3GAL5Q9UNP4 418 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 UMODL1Q5DID0 1318 aa15.96■□□□□ 0.15
TNF-208ENST00000449264 ALPK3Q96L96 1907 aa15.96■□□□□ 0.14
TNF-208ENST00000449264 PES1O00541 588 aaKnown RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 ABLIM1O14639 778 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 PRKCSHP14314 528 aaPredicted RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 HOXA11P31270 313 aaPredicted RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 ACOT2P49753 483 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 FANCCQ00597 558 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 MCL1Q07820 350 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 RBL2Q08999 1139 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 SNRNP35Q16560 246 aaKnown RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 ZBTB41Q5SVQ8 909 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 COL13A1Q5TAT6 717 aaPredicted RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 CBWD2Q8IUF1 395 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 NOC4LQ9BVI4 516 aaKnown RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 PTPRHQ9HD43 1115 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 ARMCX3Q9UH62 379 aaPredicted RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 A0A1B0GUA9 196 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 GPR182O15218 404 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 AP5Z1O43299 807 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 NPTXRO95502 500 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 ADRB2P07550 413 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 CLTBP09497 229 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 OSTNP61366 133 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 MBTPS1Q14703 1052 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 DCAF17Q5H9S7 520 aaPredicted RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 THNSL1Q8IYQ7 743 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 MKNK1Q9BUB5 465 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 PRDM5Q9NQX1 630 aaPredicted RBP15.95■□□□□ 0.14
TNF-208ENST00000449264 TMEM39AQ9NV64 488 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 PADI3Q9ULW8 664 aa15.95■□□□□ 0.14
TNF-208ENST00000449264 CITO14578 2027 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 KIAA0391O15091 583 aaKnown RBP15.94■□□□□ 0.14
TNF-208ENST00000449264 EXTL3O43909 919 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 AXLP30530 894 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 TCERG1LQ5VWI1 586 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 TWF2Q6IBS0 349 aaKnown RBP15.94■□□□□ 0.14
TNF-208ENST00000449264 SLC27A1Q6PCB7 646 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 FRMD5Q7Z6J6 570 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 CEP120Q8N960 986 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 TMEM174Q8WUU8 243 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 TUBGCP2Q9BSJ2 902 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 EIF2AQ9BY44 585 aaKnown RBP15.94■□□□□ 0.14
TNF-208ENST00000449264 TRIM6Q9C030 488 aaPredicted RBP15.94■□□□□ 0.14
TNF-208ENST00000449264 TRIM5Q9C035 493 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 VPS16Q9H269 839 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 IFNKQ9P0W0 207 aa15.94■□□□□ 0.14
TNF-208ENST00000449264 LIMA1Q9UHB6 759 aaKnown RBP15.94■□□□□ 0.14
TNF-208ENST00000449264 OGTO15294 1046 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 LDHAP00338 332 aaKnown RBP15.93■□□□□ 0.14
TNF-208ENST00000449264 TPM2P07951 284 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 MCF2P10911 925 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 CYP2C18P33260 490 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 TNFSF9P41273 254 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 COPB1P53618 953 aaKnown RBP15.93■□□□□ 0.14
TNF-208ENST00000449264 CCL23P55773 120 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 DCAF4L1Q3SXM0 396 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 UBE2Q1Q7Z7E8 422 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 SCLYQ96I15 445 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 FBXL18Q96ME1 805 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 METTL14Q9HCE5 456 aaKnown RBP15.93■□□□□ 0.14
TNF-208ENST00000449264 ERVK-5Q9HDB9 667 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 TBX21Q9UL17 535 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 TET1Q8NFU7 2136 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 ANK1P16157 1881 aa15.93■□□□□ 0.14
TNF-208ENST00000449264 ZNF233A6NK53 670 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 FAM189A1O60320 539 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 KRT13P13646 458 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 MARSP56192 900 aaKnown RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 UBASH3AP57075 661 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 BFSP1Q12934 665 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 MAN2A1Q16706 1144 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 SARM1Q6SZW1 724 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 APTXQ7Z2E3 356 aaKnown RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 APBB1IPQ7Z5R6 666 aaPredicted RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 USP38Q8NB14 1042 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 IFIH1Q9BYX4 1025 aaKnown RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 XPO4Q9C0E2 1151 aaKnown RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 WNT8AQ9H1J5 351 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 KIAA1586Q9HCI6 787 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 RBAKQ9NYW8 714 aaPredicted RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.92■□□□□ 0.14
TNF-208ENST00000449264 TRIM49P0CI25 452 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 TRIM49CP0CI26 452 aa15.92■□□□□ 0.14
TNF-208ENST00000449264 ZSCAN20P17040 1043 aaPredicted RBP15.92■□□□□ 0.14
TNF-208ENST00000449264 IBSPP21815 317 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms