RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 HSP90AA2PQ14568 343 aaPredicted RBP21.3■■□□□ 1
SGCE-207ENST00000447873 EEF1DP3Q658K8 133 aa21.3■■□□□ 1
SGCE-207ENST00000447873 SARM1Q6SZW1 724 aa21.3■■□□□ 1
SGCE-207ENST00000447873 USP38Q8NB14 1042 aa21.3■■□□□ 1
SGCE-207ENST00000447873 ADPGKQ9BRR6 497 aa21.3■■□□□ 1
SGCE-207ENST00000447873 FAM213AQ9BRX8 229 aa21.3■■□□□ 1
SGCE-207ENST00000447873 KIAA1586Q9HCI6 787 aa21.3■■□□□ 1
SGCE-207ENST00000447873 ARMCX3Q9UH62 379 aaPredicted RBP21.3■■□□□ 1
SGCE-207ENST00000447873 ST3GAL5Q9UNP4 418 aa21.3■■□□□ 1
SGCE-207ENST00000447873 PIN4Q9Y237 131 aaKnown RBP21.3■■□□□ 1
SGCE-207ENST00000447873 SQORQ9Y6N5 450 aa21.3■■□□□ 1
SGCE-207ENST00000447873 PITPNM1O00562 1244 aa21.29■■□□□ 1
SGCE-207ENST00000447873 ABLIM1O14639 778 aa21.29■■□□□ 1
SGCE-207ENST00000447873 EXTL3O43909 919 aa21.29■■□□□ 1
SGCE-207ENST00000447873 HOXA11P31270 313 aaPredicted RBP21.29■■□□□ 1
SGCE-207ENST00000447873 MARSP56192 900 aaKnown RBP21.29■■□□□ 1
SGCE-207ENST00000447873 NFX1Q12986 1120 aaKnown RBP21.29■■□□□ 1
SGCE-207ENST00000447873 SNRNP35Q16560 246 aaKnown RBP21.29■■□□□ 1
SGCE-207ENST00000447873 LRRC26Q2I0M4 334 aa21.29■■□□□ 1
SGCE-207ENST00000447873 LRRC8DQ7L1W4 858 aa21.29■■□□□ 1
SGCE-207ENST00000447873 APBB1IPQ7Z5R6 666 aaPredicted RBP21.29■■□□□ 1
SGCE-207ENST00000447873 ZSWIM2Q8NEG5 633 aa21.29■■□□□ 1
SGCE-207ENST00000447873 FBXL18Q96ME1 805 aa21.29■■□□□ 1
SGCE-207ENST00000447873 TUBGCP2Q9BSJ2 902 aa21.29■■□□□ 1
SGCE-207ENST00000447873 TRIM5Q9C035 493 aa21.29■■□□□ 1
SGCE-207ENST00000447873 LRRC10BA6NIK2 292 aa21.28■■□□□ 1
SGCE-207ENST00000447873 MAPK13O15264 365 aa21.28■■□□□ 1
SGCE-207ENST00000447873 TPM2P07951 284 aa21.28■■□□□ 1
SGCE-207ENST00000447873 MCF2P10911 925 aa21.28■■□□□ 1
SGCE-207ENST00000447873 PRKCSHP14314 528 aaPredicted RBP21.28■■□□□ 1
SGCE-207ENST00000447873 ACOT2P49753 483 aa21.28■■□□□ 1
SGCE-207ENST00000447873 UBASH3AP57075 661 aa21.28■■□□□ 1
SGCE-207ENST00000447873 PAK2Q13177 524 aa21.28■■□□□ 1
SGCE-207ENST00000447873 LPIN1Q14693 890 aa21.28■■□□□ 1
SGCE-207ENST00000447873 SLC27A1Q6PCB7 646 aa21.28■■□□□ 1
SGCE-207ENST00000447873 TRAF7Q6Q0C0 670 aa21.28■■□□□ 1
SGCE-207ENST00000447873 CBWD2Q8IUF1 395 aa21.28■■□□□ 1
SGCE-207ENST00000447873 CDT1Q9H211 546 aa21.28■■□□□ 1
SGCE-207ENST00000447873 HIPK3Q9H422 1215 aa21.28■■□□□ 1
SGCE-207ENST00000447873 AGO3Q9H9G7 860 aaKnown RBP21.28■■□□□ 1
SGCE-207ENST00000447873 TAB2Q9NYJ8 693 aa21.28■■□□□ 1
SGCE-207ENST00000447873 IFNKQ9P0W0 207 aa21.28■■□□□ 1
SGCE-207ENST00000447873 ZNF233A6NK53 670 aa21.27■■□□□ 1
SGCE-207ENST00000447873 OGTO15294 1046 aa21.27■■□□□ 1
SGCE-207ENST00000447873 AP5Z1O43299 807 aa21.27■■□□□ 1
SGCE-207ENST00000447873 KRT13P13646 458 aa21.27■■□□□ 1
SGCE-207ENST00000447873 CD52P31358 61 aa21.27■■□□□ 1
SGCE-207ENST00000447873 COPB1P53618 953 aaKnown RBP21.27■■□□□ 1
SGCE-207ENST00000447873 FILIP1LQ4L180 1135 aa21.27■■□□□ 1
SGCE-207ENST00000447873 INTS8Q75QN2 995 aaKnown RBP21.27■■□□□ 1
SGCE-207ENST00000447873 NOC4LQ9BVI4 516 aaKnown RBP21.27■■□□□ 1
SGCE-207ENST00000447873 PADI3Q9ULW8 664 aa21.27■■□□□ 1
SGCE-207ENST00000447873 CLTBP09497 229 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 MAN2A1Q16706 1144 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 DCAF4L1Q3SXM0 396 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 APTXQ7Z2E3 356 aaKnown RBP21.27■□□□□ 0.99
SGCE-207ENST00000447873 TRIM59Q8IWR1 403 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 THNSL1Q8IYQ7 743 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 ANP32BQ92688 251 aaKnown RBP21.27■□□□□ 0.99
SGCE-207ENST00000447873 BORCS6Q96GS4 357 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 OSBPL7Q9BZF2 842 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 VPS16Q9H269 839 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 ERVK-5Q9HDB9 667 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 TMEM39AQ9NV64 488 aa21.27■□□□□ 0.99
SGCE-207ENST00000447873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.27■□□□□ 0.99
SGCE-207ENST00000447873 TULP1O00294 542 aaPredicted RBP21.26■□□□□ 0.99
SGCE-207ENST00000447873 PES1O00541 588 aaKnown RBP21.26■□□□□ 0.99
SGCE-207ENST00000447873 CBFA2T2O43439 604 aa21.26■□□□□ 0.99
SGCE-207ENST00000447873 SEZ6Q53EL9 994 aa21.26■□□□□ 0.99
SGCE-207ENST00000447873 ZBTB41Q5SVQ8 909 aa21.26■□□□□ 0.99
SGCE-207ENST00000447873 UBE2Q1Q7Z7E8 422 aa21.26■□□□□ 0.99
SGCE-207ENST00000447873 CCDC51Q96ER9 411 aa21.26■□□□□ 0.99
SGCE-207ENST00000447873 NAP1L5Q96NT1 182 aaPredicted RBP21.26■□□□□ 0.99
SGCE-207ENST00000447873 TRIM6Q9C030 488 aaPredicted RBP21.26■□□□□ 0.99
SGCE-207ENST00000447873 CHST12Q9NRB3 414 aa21.26■□□□□ 0.99
SGCE-207ENST00000447873 FAM189A1O60320 539 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 NPTXRO95502 500 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 TPM3P06753 285 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 ADRB2P07550 413 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 BFSP1Q12934 665 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 MBTPS1Q14703 1052 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 KYAT1Q16773 422 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 DCAF17Q5H9S7 520 aaPredicted RBP21.25■□□□□ 0.99
SGCE-207ENST00000447873 TCERG1LQ5VWI1 586 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 TWF2Q6IBS0 349 aaKnown RBP21.25■□□□□ 0.99
SGCE-207ENST00000447873 CRELD2Q6UXH1 353 aaPredicted RBP21.25■□□□□ 0.99
SGCE-207ENST00000447873 PPP1R12CQ9BZL4 782 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 XPO4Q9C0E2 1151 aaKnown RBP21.25■□□□□ 0.99
SGCE-207ENST00000447873 TBX21Q9UL17 535 aa21.25■□□□□ 0.99
SGCE-207ENST00000447873 TANC1Q9C0D5 1861 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 UMODL1Q5DID0 1318 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 A0A1B0GTH6 734 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 RBAK-RBAKDNI3L0D1 243 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 ADCY5O95622 1261 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 ZSCAN20P17040 1043 aaPredicted RBP21.24■□□□□ 0.99
SGCE-207ENST00000447873 TNFSF9P41273 254 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 OSTNP61366 133 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 PPP2R3AQ06190 1150 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 CYP24A1Q07973 514 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 VWA3BQ502W6 1294 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms