RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	FOXP2	O15409	715 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	TLR2	O60603	784 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	PRL	P01236	227 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	IL2RB	P14784	551 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	VHL	P40337	213 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	BCAP31	P51572	246 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	EPHB4	P54760	987 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	POLA2	Q14181	598 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	CCDC6	Q16204	474 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	SMU1	Q2TAY7	513 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	CCDC89	Q8N998	374 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	IL17RE	Q8NFR9	667 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	NLRP7	Q8WX94	980 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ATL1	Q8WXF7	558 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZNF496	Q96IT1	587 aa	Predicted RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	COX4I2	Q96KJ9	171 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	AIFM3	Q96NN9	605 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	NEURL2	Q9BR09	285 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	TTPAL	Q9BTX7	342 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	CCDC28B	Q9BUN5	200 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ANO2	Q9NQ90	1003 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ABI2	Q9NYB9	513 aa	Predicted RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	VPS51	Q9UID3	782 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	PCDH11X	Q9BZA7	1347 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	PARP4	Q9UKK3	1724 aa	Known RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	SOWAHD	A6NJG2	315 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	SYCE1L	A8MT33	242 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329		E9PMD0	336 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	PABPC4L	P0CB38	370 aa	Known RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	PTGS2	P35354	604 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	UBA7	P41226	1012 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	FXR1	P51114	621 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	DSC3	Q14574	896 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	TGFBI	Q15582	683 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	PHKG1	Q16816	387 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	MTERF2	Q49AM1	385 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	UBE3B	Q7Z3V4	1068 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	C16orf71	Q8IYS4	520 aa	Predicted RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	LZTR1	Q8N653	840 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	SUPT20H	Q8NEM7	779 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	LILRB4	Q8NHJ6	448 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	PLEKHO2	Q8TD55	490 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	PIGO	Q8TEQ8	1089 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	VPS35	Q96QK1	796 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	MARCH7	Q9H992	704 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	ARHGEF3	Q9NR81	526 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	KLHL3	Q9UH77	587 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	DPP7	Q9UHL4	492 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	EVL	Q9UI08	416 aa	Predicted RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	LZTS1	Q9Y250	596 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329		A0A088AWK7	358 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	SH3PXD2B	A1X283	911 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	ALDH1L1	O75891	902 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	OR6B1	O95007	311 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	FKBP9	O95302	570 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	S100A6	P06703	90 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	ME1	P48163	572 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	PLCD1	P51178	756 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	MLLT6	P55198	1093 aa	Predicted RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	COPS2	P61201	443 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	ADAM17	P78536	824 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	RNASEL	Q05823	741 aa	Known RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	SMARCB1	Q12824	385 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	NFE2L1	Q14494	772 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	ITIH4	Q14624	930 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	EPHA7	Q15375	998 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	VPS72	Q15906	364 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	LETM2	Q2VYF4	491 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	DPCR1	Q3MIW9	517 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	VWA3B	Q502W6	1294 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	RESP18	Q5W5W9	173 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	SPECC1L	Q69YQ0	1117 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	MPRIP	Q6WCQ1	1025 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	RNF169	Q8NCN4	708 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	CHMP6	Q96FZ7	201 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	RAB3IP	Q96QF0	476 aa	Predicted RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	RNF41	Q9H4P4	317 aa	Predicted RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	IL20	Q9NYY1	176 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	GGA3	Q9NZ52	723 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	NDC80	O14777	642 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	OPHN1	O60890	802 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	INMT	O95050	263 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	EPN2	O95208	641 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	EIF2S1	P05198	315 aa	Known RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	CAPN1	P07384	714 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	GUCY1A2	P33402	732 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	HSPA9	P38646	679 aa	Known RBP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	ECE1	P42892	770 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	SLC1A1	P43005	524 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	STAT2	P52630	851 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	POLR2G	P62487	172 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	AMPD2	Q01433	879 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	KRT76	Q01546	638 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	CDK18	Q07002	472 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	LPIN1	Q14693	890 aa		7.23	□□□□□ -1.25
TRIM6-205	ENST00000445329	KCNJ8	Q15842	424 aa		7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms