RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PRG3Q9Y2Y8 225 aaPredicted RBP12.02□□□□□ -0.49
SF3A1-203ENST00000444440 TCHHQ07283 1943 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 VWA3AA6NCI4 1184 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 LAD1O00515 517 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 LILRB3O75022 631 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 HIP1RO75146 1068 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 WEE2P0C1S8 567 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 IGFBP6P24592 240 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-203ENST00000444440 NAB2Q15742 525 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 HYIQ5T013 277 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 KRT79Q5XKE5 535 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
SF3A1-203ENST00000444440 RINT1Q6NUQ1 792 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 C1orf186Q6ZWK4 172 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 RNF135Q8IUD6 432 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 ZBTB8OSQ8IWT0 167 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 RNF168Q8IYW5 571 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-203ENST00000444440 C12orf76Q8N812 135 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-203ENST00000444440 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 SLC22A17Q8WUG5 538 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 RSPH1Q8WYR4 309 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 B3GALT6Q96L58 329 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 PRIMPOLQ96LW4 560 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 FAM193BQ96PV7 902 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-203ENST00000444440 TMEM175Q9BSA9 504 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 TRIM6Q9C030 488 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-203ENST00000444440 SNTG2Q9NY99 539 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 FAM50BQ9Y247 325 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 FAN1Q9Y2M0 1017 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 GIT1Q9Y2X7 761 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 IRAK3Q9Y616 596 aa12.01□□□□□ -0.49
SF3A1-203ENST00000444440 TSC2P49815 1807 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 SFI1A8K8P3 1242 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 LOC730098B7Z3J9 87 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 ACKR2O00590 384 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 PTGESO14684 152 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 ALDH2P05091 517 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 CNPP09543 421 aaKnown RBP12□□□□□ -0.49
SF3A1-203ENST00000444440 OR1G1P47890 313 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 NPTX2P47972 431 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 PEX3P56589 373 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 RAD51AP2Q09MP3 1159 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 PRPF4BQ13523 1007 aaKnown RBP12□□□□□ -0.49
SF3A1-203ENST00000444440 ZRSR1Q15695 479 aaKnown RBP12□□□□□ -0.49
SF3A1-203ENST00000444440 MAPK6Q16659 721 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 TMEM119Q4V9L6 283 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 CEP120Q8N960 986 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 DEPTORQ8TB45 409 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 GPR62Q9BZJ7 368 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 C2orf40Q9H1Z8 148 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 UBN1Q9NPG3 1134 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 KANSL3Q9P2N6 904 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 PARP2Q9UGN5 583 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 MUTYHQ9UIF7 546 aa12□□□□□ -0.49
SF3A1-203ENST00000444440 NPHP3-ACAD11A0A0J9YXS1 232 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 C2CD2LO14523 706 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 N4BP3O15049 544 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 MEFVO15553 781 aaPredicted RBP11.99□□□□□ -0.49
SF3A1-203ENST00000444440 RECQL4O94761 1208 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 SP100P23497 879 aaPredicted RBP11.99□□□□□ -0.49
SF3A1-203ENST00000444440 SLC12A3P55017 1021 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 FAM173BQ6P4H8 233 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 KIFAP3Q92845 792 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 CASP10Q92851 521 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 HERC2P3Q9BVR0 1158 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 PHF7Q9BWX1 381 aaPredicted RBP11.99□□□□□ -0.49
SF3A1-203ENST00000444440 C1QTNF1Q9BXJ1 281 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 RAB34Q9BZG1 259 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 POMKQ9H5K3 350 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 ARHGAP28Q9P2N2 729 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 DNM3Q9UQ16 869 aa11.99□□□□□ -0.49
SF3A1-203ENST00000444440 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.99□□□□□ -0.49
SF3A1-203ENST00000444440 ZMYM2Q9UBW7 1377 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 PHLPP2Q6ZVD8 1323 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 VPS37CA5D8V6 355 aaPredicted RBP11.98□□□□□ -0.49
SF3A1-203ENST00000444440 CASTOR2A6NHX0 329 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 CCDC169A6NNP5 214 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 ABLIM1O14639 778 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 DCXO43602 365 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 GPR37L1O60883 481 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 SOD2P04179 222 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 CLCN4P51793 760 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
SF3A1-203ENST00000444440 NCBP1Q09161 790 aaKnown RBP11.98□□□□□ -0.49
SF3A1-203ENST00000444440 GRIK3Q13003 919 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 CBX2Q14781 532 aaPredicted RBP11.98□□□□□ -0.49
SF3A1-203ENST00000444440 PPP2R5AQ15172 486 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 ARSHQ5FYA8 562 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 TMEM31Q5JXX7 168 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 RARS2Q5T160 578 aaKnown RBP11.98□□□□□ -0.49
SF3A1-203ENST00000444440 KIAA0319Q5VV43 1072 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 ARL6IP4Q66PJ3 421 aaKnown RBP11.98□□□□□ -0.49
SF3A1-203ENST00000444440 TMEM130Q8N3G9 435 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 HASPINQ8TF76 798 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 RPGRIP1Q96KN7 1286 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 IFT74Q96LB3 600 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 PTPRHQ9HD43 1115 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
SF3A1-203ENST00000444440 BLOC1S4Q9NUP1 217 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms