RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 IFT74Q96LB3 600 aa8.62□□□□□ -1.03
CD44-211ENST00000442151 ADPGKQ9BRR6 497 aa8.62□□□□□ -1.03
CD44-211ENST00000442151 ZBP1Q9H171 429 aa8.62□□□□□ -1.03
CD44-211ENST00000442151 S1PR5Q9H228 398 aa8.62□□□□□ -1.03
CD44-211ENST00000442151 UPF2Q9HAU5 1272 aaKnown RBP8.62□□□□□ -1.03
CD44-211ENST00000442151 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.62□□□□□ -1.03
CD44-211ENST00000442151 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
CD44-211ENST00000442151 CHD9Q3L8U1 2897 aa8.62□□□□□ -1.03
CD44-211ENST00000442151 ARHGEF35A5YM69 484 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 FAM86C2PA6NEL3 165 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 TMEM221A6NGB7 291 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 M0R296 226 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 LAD1O00515 517 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 N4BP3O15049 544 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 WIPF1O43516 503 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 CSDE1O75534 798 aaKnown RBP8.61□□□□□ -1.03
CD44-211ENST00000442151 URODP06132 367 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 ADH1AP07327 375 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 FDPSP14324 419 aaKnown RBP8.61□□□□□ -1.03
CD44-211ENST00000442151 ATP2B1P20020 1258 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 ARL2P36404 184 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 NR5A1Q13285 461 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 KCNC3Q14003 757 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 PDXDC1Q6P996 788 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 SLC27A1Q6PCB7 646 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 STAMQ92783 540 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 TNFRSF25Q93038 417 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 MTMR9Q96QG7 549 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 RPS6KC1Q96S38 1066 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 SH2D3AQ9BRG2 576 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 GBP3Q9H0R5 595 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 SFXN1Q9H9B4 322 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 MUTYHQ9UIF7 546 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 WDR81Q562E7 1941 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 TMEM150BA6NC51 233 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 HIDE1A8MVS5 230 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 NT5C1B-RDH14C9J2C7 533 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 TULP1O00294 542 aaPredicted RBP8.61□□□□□ -1.03
CD44-211ENST00000442151 INPPL1O15357 1258 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 SOD2P04179 222 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 OR52Z1P0C646 297 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 RPA1P27694 616 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 OR1G1P47890 313 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 RARRES1P49788 294 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 EFNA5P52803 228 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 SPIRE1Q08AE8 756 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 PDIA5Q14554 519 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 PROX2Q3B8N5 592 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 AGMOQ6ZNB7 445 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 OTOP3Q7RTS5 596 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 ZDHHC14Q8IZN3 488 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 TDRD5Q8NAT2 981 aaKnown RBP8.61□□□□□ -1.03
CD44-211ENST00000442151 LPPQ93052 612 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 FBXL18Q96ME1 805 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 RHOBTB2Q9BYZ6 727 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 HCFC2Q9Y5Z7 792 aa8.61□□□□□ -1.03
CD44-211ENST00000442151 NRP1O14786 923 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 TADA2AO75478 443 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 WFS1O76024 890 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 HOXA11P31270 313 aaPredicted RBP8.6□□□□□ -1.03
CD44-211ENST00000442151 MCM7P33993 719 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 SLC11A1P49279 550 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 ELAVL2Q12926 359 aaKnown RBP8.6□□□□□ -1.03
CD44-211ENST00000442151 MAPK6Q16659 721 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 PTPN21Q16825 1174 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 FAM187BQ17R55 369 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 SYCE2Q6PIF2 218 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 FBXL6Q8N531 539 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 VN1R2Q8NFZ6 395 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 DEPTORQ8TB45 409 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 SLC22A17Q8WUG5 538 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 KIFAP3Q92845 792 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 NXPE3Q969Y0 559 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 KLHL5Q96PQ7 755 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 HERC2P3Q9BVR0 1158 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 TIPINQ9BVW5 301 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 C11orf16Q9NQ32 467 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 IPPQ9Y573 584 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.6□□□□□ -1.03
CD44-211ENST00000442151 KIAA1671Q9BY89 1806 aa8.6□□□□□ -1.03
CD44-211ENST00000442151 A0A1B0GUA9 196 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 LRRIQ4A6NIV6 560 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 TSPAN1O60635 241 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 POMCP01189 267 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 CYP11B2P19099 503 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 MCM2P49736 904 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 GRIK3Q13003 919 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 MTMR3Q13615 1198 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 TTC38Q5R3I4 469 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 UBXN11Q5T124 520 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 RARS2Q5T160 578 aaKnown RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 C15orf39Q6ZRI6 1047 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 RTL10Q7L3V2 364 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 CMASQ8NFW8 434 aaPredicted RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 FBXO18Q8NFZ0 1043 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 POLR3FQ9H1D9 316 aaPredicted RBP8.59□□□□□ -1.03
CD44-211ENST00000442151 PLEKHA4Q9H4M7 779 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
CD44-211ENST00000442151 GJB4Q9NTQ9 266 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms