RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 KIAA1683Q9H0B3 1180 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 LRMDAQ9H2I8 198 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 PREBQ9HCU5 417 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 AIPL1Q9NZN9 384 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 AMFRQ9UKV5 643 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 EDIL3O43854 480 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 NOVP48745 357 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 TNIP1Q15025 636 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 CKAP2Q8WWK9 683 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 OPTNQ96CV9 577 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 DTNBP1Q96EV8 351 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 NAP1L3Q99457 506 aaPredicted RBP17.98■□□□□ 0.47
PMS1-213ENST00000441310 DDX50Q9BQ39 737 aaKnown RBP17.98■□□□□ 0.47
PMS1-213ENST00000441310 MMADHCQ9H3L0 296 aaPredicted RBP17.98■□□□□ 0.47
PMS1-213ENST00000441310 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 TCP10L2B9ZVM9 353 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 CETN3O15182 167 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 ACSL3O95573 720 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 JAG1P78504 1218 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 MPP2Q14168 576 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 MYBPC3Q14896 1274 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 CMPK2Q5EBM0 449 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 C18orf8Q96DM3 657 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 TBC1D7Q9P0N9 293 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 CTTNBP2NLQ9P2B4 639 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 STXBP5LQ9Y2K9 1186 aa17.98■□□□□ 0.47
PMS1-213ENST00000441310 SCN9AQ15858 1988 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 SETSIPP0DME0 302 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 RPL21P46778 160 aaKnown RBP17.97■□□□□ 0.47
PMS1-213ENST00000441310 RNF43Q68DV7 783 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 MMTAG2Q9BU76 263 aaKnown RBP17.97■□□□□ 0.47
PMS1-213ENST00000441310 OSGEPQ9NPF4 335 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 MTRF1LQ9UGC7 380 aaKnown RBP17.97■□□□□ 0.47
PMS1-213ENST00000441310 LRCH1Q9Y2L9 728 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 BTNL10A8MVZ5 291 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 UBTFL6P0CB48 400 aaPredicted RBP17.97■□□□□ 0.47
PMS1-213ENST00000441310 SNHG28P0DPA3 235 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 USH1GQ495M9 461 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 SLFN13Q68D06 897 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 AADACL2Q6P093 401 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 UNC13DQ70J99 1090 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 NELFCDQ8IXH7 590 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 ENDOVQ8N8Q3 282 aaKnown RBP17.97■□□□□ 0.47
PMS1-213ENST00000441310 CALML4Q96GE6 196 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 GALNT8Q9NY28 637 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
PMS1-213ENST00000441310 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
PMS1-213ENST00000441310 CBX6O95503 412 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 H2AFZP0C0S5 128 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 DCAF12L1Q5VU92 463 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 H2AFVQ71UI9 128 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 PITPNM3Q9BZ71 974 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 DMAP1Q9NPF5 467 aaPredicted RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 GRHL1Q9NZI5 618 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 ARMCX3Q9UH62 379 aaPredicted RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 YDJCA8MPS7 323 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 BRAFP15056 766 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 C1QTNF12Q5T7M4 302 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 SNX30Q5VWJ9 437 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 BTNL9Q6UXG8 535 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 CROCCP2Q86T23 111 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 RBM12BQ8IXT5 1001 aaKnown RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 U2AF1L4Q8WU68 220 aaKnown RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 SCG3Q8WXD2 468 aaKnown RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 ZWILCHQ9H900 591 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 SRCAPQ6ZRS2 3230 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 COL11A2P13942 1736 aaPredicted RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 GSTA2P09210 222 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 SKIP12755 728 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 VHLP40337 213 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 MCL1Q07820 350 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 QRICH1Q2TAL8 776 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 KHDC1Q4VXA5 237 aaKnown RBP17.96■□□□□ 0.47
PMS1-213ENST00000441310 IRF2BP2Q7Z5L9 587 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 HES6Q96HZ4 224 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 STOML1Q9UBI4 398 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 RASAL2Q9UJF2 1139 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 PPP1R9AQ9ULJ8 1098 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 PCDHA1Q9Y5I3 950 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 PFASO15067 1338 aa17.96■□□□□ 0.47
PMS1-213ENST00000441310 GH2P01242 217 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 ZCCHC18P0CG32 403 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 ETS2P15036 469 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 MAGEA8P43361 318 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 FKBP3Q00688 224 aaKnown RBP17.95■□□□□ 0.46
PMS1-213ENST00000441310 MAPK7Q13164 816 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 MYLK4Q86YV6 388 aaPredicted RBP17.95■□□□□ 0.46
PMS1-213ENST00000441310 SYCE1Q8N0S2 351 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 TBK1Q9UHD2 729 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.95■□□□□ 0.46
PMS1-213ENST00000441310 hCG_2014768A0A024R1R8 64 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 ZBTB5O15062 677 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 SLC9A1P19634 815 aa17.95■□□□□ 0.46
PMS1-213ENST00000441310 COBLL1Q53SF7 1204 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms