RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ODF2LQ9ULJ1 636 aa20.08■□□□□ 0.81
SMPD4-210ENST00000441135 ZDHHC9Q9Y397 364 aa20.08■□□□□ 0.81
SMPD4-210ENST00000441135 ATP6V1DQ9Y5K8 247 aa20.08■□□□□ 0.81
SMPD4-210ENST00000441135 C19orf67A6NJJ6 358 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 NT5C1B-RDH14C9J2C7 533 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 INPPL1O15357 1258 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 CUTAO60888 179 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 HIP1RO75146 1068 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 DMP1Q13316 513 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 MAPK6Q16659 721 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 FOXD4L5Q5VV16 416 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 USP49Q70CQ1 688 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 DDX53Q86TM3 631 aaKnown RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 TMEM173Q86WV6 379 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 VN1R2Q8NFZ6 395 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 LRRC15Q8TF66 581 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 SPIRE2Q8WWL2 714 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 FOXD4L4Q8WXT5 416 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 LARP4BQ92615 738 aaKnown RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 CPB2Q96IY4 423 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 FAM193BQ96PV7 902 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 PLIN2Q99541 437 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 EIF2AQ9BY44 585 aaKnown RBP20.07■□□□□ 0.8
SMPD4-210ENST00000441135 CCDC113Q9H0I3 377 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 GBP3Q9H0R5 595 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 EPHX3Q9H6B9 360 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 ZMYM2Q9UBW7 1377 aa20.07■□□□□ 0.8
SMPD4-210ENST00000441135 C2orf71A6NGG8 1288 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 PI4K2BG5E9Z4 385 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 SSBP05455 408 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMPD4-210ENST00000441135 SCP2P22307 547 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 DDIT3P35638 169 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 SLC11A1P49279 550 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 KCNC3Q14003 757 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 GIT2Q14161 759 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 SLC27A1Q6PCB7 646 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 CCDC73Q6ZRK6 1079 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 VPS52Q8N1B4 723 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 KHSRPQ92945 711 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMPD4-210ENST00000441135 NTPCRQ9BSD7 190 aaKnown RBP20.06■□□□□ 0.8
SMPD4-210ENST00000441135 ZBP1Q9H171 429 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 DNAJB4Q9UDY4 337 aa20.06■□□□□ 0.8
SMPD4-210ENST00000441135 RBM19Q9Y4C8 960 aaKnown RBP20.06■□□□□ 0.8
SMPD4-210ENST00000441135 USP15Q9Y4E8 981 aaPredicted RBP20.06■□□□□ 0.8
SMPD4-210ENST00000441135 A0A1B0GUA9 196 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 ACKR2O00590 384 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 B4GALT5O43286 388 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 ALADP13716 330 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 HOXB8P17481 243 aaPredicted RBP20.05■□□□□ 0.8
SMPD4-210ENST00000441135 NPTX2P47972 431 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 RBM10P98175 930 aaKnown RBP20.05■□□□□ 0.8
SMPD4-210ENST00000441135 ARSHQ5FYA8 562 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 SPECC1Q5M775 1068 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 RRAGBQ5VZM2 374 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 ZNF280BQ86YH2 543 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 CASP10Q92851 521 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 TMEM134Q9H6X4 195 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 ARHGAP28Q9P2N2 729 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 RCOR1Q9UKL0 485 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 GIT1Q9Y2X7 761 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 IRAK3Q9Y616 596 aa20.05■□□□□ 0.8
SMPD4-210ENST00000441135 ARL5CA6NH57 179 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 B4GALT3O60512 393 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 CXCL14O95715 111 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 POMCP01189 267 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 PRKCBP05771 671 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 CTSAP10619 480 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 PLS3P13797 630 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 MLH1P40692 756 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 AFF1P51825 1210 aaKnown RBP20.04■□□□□ 0.8
SMPD4-210ENST00000441135 ZNF131P52739 623 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 PEX3P56589 373 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 DNM1Q05193 864 aaKnown RBP20.04■□□□□ 0.8
SMPD4-210ENST00000441135 AXDND1Q5T1B0 1012 aaPredicted RBP20.04■□□□□ 0.8
SMPD4-210ENST00000441135 ANKRD54Q6NXT1 300 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 GPBP1Q86WP2 473 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 TMEM87AQ8NBN3 555 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 BCL7CQ8WUZ0 217 aaPredicted RBP20.04■□□□□ 0.8
SMPD4-210ENST00000441135 GAD1Q99259 594 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 NXF3Q9H4D5 531 aaKnown RBP20.04■□□□□ 0.8
SMPD4-210ENST00000441135 LARSQ9P2J5 1176 aaKnown RBP20.04■□□□□ 0.8
SMPD4-210ENST00000441135 HES2Q9Y543 173 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 MYH11P35749 1972 aa20.04■□□□□ 0.8
SMPD4-210ENST00000441135 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.03■□□□□ 0.8
SMPD4-210ENST00000441135 H0YCG3 227 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 N4BP3O15049 544 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 DDHD2O94830 711 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 ALDH2P05091 517 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 CA8P35219 290 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 SMTNP53814 917 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 KRT85P78386 507 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 NUCB2P80303 420 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 MCM6Q14566 821 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 TMEM31Q5JXX7 168 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 LLGL2Q6P1M3 1020 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 SUSD6Q92537 303 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 RNF39Q9H2S5 420 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 CUEDC2Q9H467 287 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 KMT5AQ9NQR1 393 aa20.03■□□□□ 0.8
SMPD4-210ENST00000441135 FAN1Q9Y2M0 1017 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms