RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CNNM3Q8NE01 707 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 HDAC7Q8WUI4 952 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 FGF14Q92915 247 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 CNTNAP3BQ96NU0 1288 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 CNTNAP3Q9BZ76 1288 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 DHX33Q9H6R0 707 aaKnown RBP16.53■□□□□ 0.24
HDAC8-213ENST00000436675 SLC2A4RGQ9NR83 387 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 CHST7Q9NS84 486 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 DLL3Q9NYJ7 618 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 NCDNQ9UBB6 729 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 CACNG4Q9UBN1 327 aa16.53■□□□□ 0.24
HDAC8-213ENST00000436675 MTF2Q9Y483 593 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-213ENST00000436675 NID2Q14112 1375 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 PATJQ8NI35 1801 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 TSPAN1O60635 241 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 IFNAR1P17181 557 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 AKAP5P24588 427 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 EMC2Q15006 297 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 INF2Q27J81 1249 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 USP41Q3LFD5 358 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 LILRA6Q6PI73 481 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 FERMT3Q86UX7 667 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 BLIDQ8IZY5 108 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 KLK14Q9P0G3 267 aa16.52■□□□□ 0.24
HDAC8-213ENST00000436675 ZBTB39O15060 712 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 ZMYND10O75800 440 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 CD72P21854 359 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 RFC5P40937 340 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 STARD6P59095 220 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 CSTF1Q05048 431 aaKnown RBP16.51■□□□□ 0.23
HDAC8-213ENST00000436675 XKR9Q5GH70 373 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 NOTUMQ6P988 496 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 CDR2LQ86X02 465 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-213ENST00000436675 SHDQ96IW2 340 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 MBOAT7Q96N66 472 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 TRIM6Q9C030 488 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-213ENST00000436675 CSRNP2Q9H175 543 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 NXF3Q9H4D5 531 aaKnown RBP16.51■□□□□ 0.23
HDAC8-213ENST00000436675 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDAC8-213ENST00000436675 RGL1Q9NZL6 768 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 ADAM28Q9UKQ2 775 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 POLIQ9UNA4 740 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 SNX14Q9Y5W7 946 aa16.51■□□□□ 0.23
HDAC8-213ENST00000436675 KANSL1LA0AUZ9 987 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 INO80B-WBP1J3KQ70 363 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 TADA2AO75478 443 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 P4HBP07237 508 aaKnown RBP16.5■□□□□ 0.23
HDAC8-213ENST00000436675 PDIA3P30101 505 aaKnown RBP16.5■□□□□ 0.23
HDAC8-213ENST00000436675 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
HDAC8-213ENST00000436675 MLF2Q15773 248 aaPredicted RBP16.5■□□□□ 0.23
HDAC8-213ENST00000436675 BMP2KLQ5H9B9 411 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 VARS2Q5ST30 1063 aaKnown RBP16.5■□□□□ 0.23
HDAC8-213ENST00000436675 HASPINQ8TF76 798 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 TCP11Q8WWU5 503 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 AIFM3Q96NN9 605 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 MTRQ99707 1265 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 LXNQ9BS40 222 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 BCO2Q9BYV7 579 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 FNIP2Q9P278 1114 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 CDH7Q9ULB5 785 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 CHD8Q9HCK8 2581 aa16.5■□□□□ 0.23
HDAC8-213ENST00000436675 FAM170BA6NMN3 283 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 M0R2N6 131 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 CCL16O15467 120 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 ASAP2O43150 1006 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 DKC1O60832 514 aaKnown RBP eCLIP16.49■□□□□ 0.23
HDAC8-213ENST00000436675 NPTXRO95502 500 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 RPS6KB1P23443 525 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 YWHABP31946 246 aaKnown RBP16.49■□□□□ 0.23
HDAC8-213ENST00000436675 MAP1BP46821 2468 aaKnown RBP16.49■□□□□ 0.23
HDAC8-213ENST00000436675 PTENP60484 403 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 CYP4A11Q02928 519 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 NCBP1Q09161 790 aaKnown RBP16.49■□□□□ 0.23
HDAC8-213ENST00000436675 PPP2R5CQ13362 524 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
HDAC8-213ENST00000436675 SLC44A4Q53GD3 710 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 RTP2Q5QGT7 225 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 NCAPH2Q6IBW4 605 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 CEP57Q86XR8 500 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 EXOC8Q8IYI6 725 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 TRIM22Q8IYM9 498 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 ITFG1Q8TB96 612 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 DYDC2Q96IM9 177 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 KXD1Q9BQD3 176 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 PAAF1Q9BRP4 392 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
HDAC8-213ENST00000436675 PARP2Q9UGN5 583 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
HDAC8-213ENST00000436675 NOTCH4Q99466 2003 aa16.48■□□□□ 0.23
HDAC8-213ENST00000436675 B4GALT5O43286 388 aa16.48■□□□□ 0.23
HDAC8-213ENST00000436675 MARCH6O60337 910 aa16.48■□□□□ 0.23
HDAC8-213ENST00000436675 PAPLNO95428 1278 aa16.48■□□□□ 0.23
HDAC8-213ENST00000436675 ARF4P18085 180 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms