RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 ARHGEF16Q5VV41 709 aa20.1■□□□□ 0.81
FAM3A-212ENST00000434658 C12orf56Q8IXR9 622 aa20.1■□□□□ 0.81
FAM3A-212ENST00000434658 U2AF1L4Q8WU68 220 aaKnown RBP20.1■□□□□ 0.81
FAM3A-212ENST00000434658 TMEM206Q9H813 350 aa20.1■□□□□ 0.81
FAM3A-212ENST00000434658 TBC1D22BQ9NU19 505 aa20.1■□□□□ 0.81
FAM3A-212ENST00000434658 PKD2L1Q9P0L9 805 aa20.1■□□□□ 0.81
FAM3A-212ENST00000434658 DNAJC12Q9UKB3 198 aa20.1■□□□□ 0.81
FAM3A-212ENST00000434658 PACSIN2Q9UNF0 486 aaPredicted RBP20.1■□□□□ 0.81
FAM3A-212ENST00000434658 RNF40O75150 1001 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 ZNF865P0CJ78 1059 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 RFX1P22670 979 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 NPEPPSP55786 919 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 MTMR1Q13613 665 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 ACVR2BQ13705 512 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 TPCN2Q8NHX9 752 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 CAVIN3Q969G5 261 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 PBKQ96KB5 322 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 GDAP1L1Q96MZ0 367 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 MPHOSPH6Q99547 160 aaKnown RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 SYT11Q9BT88 431 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 TIPINQ9BVW5 301 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 ABHD16BQ9H3Z7 469 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 APEX2Q9UBZ4 518 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 LOC102724159A0A0B4J2E5 919 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 SEPT4O43236 478 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 TRIM49P0CI25 452 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 TRIM49CP0CI26 452 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 NOP2P46087 812 aaKnown RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 DRAP1Q14919 205 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 PWP2Q15269 919 aaKnown RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 TAF3Q5VWG9 929 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 SND1Q7KZF4 910 aaKnown RBP eCLIP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 SLFN11Q7Z7L1 901 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 USP38Q8NB14 1042 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 LNX1Q8TBB1 728 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 MORC4Q8TE76 937 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 NSUN6Q8TEA1 469 aaKnown RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 LMBR1Q8WVP7 490 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 GPR88Q9GZN0 384 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 ST6GALNAC4Q9H4F1 302 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 GDF3Q9NR23 364 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 PXMP2Q9NR77 195 aa20.09■□□□□ 0.81
FAM3A-212ENST00000434658 DDX20Q9UHI6 824 aaKnown RBP20.09■□□□□ 0.81
FAM3A-212ENST00000434658 CCDC172P0C7W6 258 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 PLS3P13797 630 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 LMAN1P49257 510 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 DNA2P51530 1060 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 NNTQ13423 1086 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 EEPD1Q7L9B9 569 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 IFT20Q8IY31 132 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 ACCSQ96QU6 501 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 TMEM59LQ9UK28 342 aa20.08■□□□□ 0.8
FAM3A-212ENST00000434658 NCANO14594 1321 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 AGPSO00116 658 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 PHACTR2O75167 634 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 KRT13P13646 458 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 MRPS25P82663 173 aaKnown RBP20.07■□□□□ 0.8
FAM3A-212ENST00000434658 PGM5Q15124 567 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 LHX8Q68G74 356 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 INTS8Q75QN2 995 aaKnown RBP20.07■□□□□ 0.8
FAM3A-212ENST00000434658 KATNBL1Q9H079 304 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 MCM3APO60318 1980 aa20.07■□□□□ 0.8
FAM3A-212ENST00000434658 GOLGA6BA6NDN3 693 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 MSCO60682 206 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 CLSTN1O94985 981 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 MYCLP12524 364 aaPredicted RBP20.06■□□□□ 0.8
FAM3A-212ENST00000434658 GGCXP38435 758 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 SNRPFP62306 86 aaKnown RBP20.06■□□□□ 0.8
FAM3A-212ENST00000434658 TNNC1P63316 161 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 C4orf19Q8IY42 314 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 LMO3Q8TAP4 145 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 ACTRT1Q8TDG2 376 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 HINFPQ9BQA5 517 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 CRISPLD2Q9H0B8 497 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 FAM204AQ9H8W3 233 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 STXBP5LQ9Y2K9 1186 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 SAMM50Q9Y512 469 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 KCNK3O14649 394 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 MAPK13O15264 365 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 P4HA2O15460 535 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 AKR1A1P14550 325 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 EDNRBP24530 442 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 YWHABP31946 246 aaKnown RBP20.06■□□□□ 0.8
FAM3A-212ENST00000434658 JAK3P52333 1124 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 DNAAF5Q86Y56 855 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 SYCE1Q8N0S2 351 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 ZBTB9Q96C00 473 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 PKNOX2Q96KN3 472 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 IWS1Q96ST2 819 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 PDCD2LQ9BRP1 358 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 CALCOCO1Q9P1Z2 691 aa20.06■□□□□ 0.8
FAM3A-212ENST00000434658 SUCLA2Q9P2R7 463 aaPredicted RBP20.06■□□□□ 0.8
FAM3A-212ENST00000434658 WDR81Q562E7 1941 aa20.05■□□□□ 0.8
FAM3A-212ENST00000434658 HEXIM1O94992 359 aaKnown RBP20.05■□□□□ 0.8
FAM3A-212ENST00000434658 GLI1P08151 1106 aa20.05■□□□□ 0.8
FAM3A-212ENST00000434658 TMEM253P0C7T8 217 aa20.05■□□□□ 0.8
FAM3A-212ENST00000434658 GALCP54803 685 aa20.05■□□□□ 0.8
FAM3A-212ENST00000434658 GTF2BQ00403 316 aa20.05■□□□□ 0.8
FAM3A-212ENST00000434658 MAEAQ7L5Y9 396 aa20.05■□□□□ 0.8
FAM3A-212ENST00000434658 GLYCTKQ8IVS8 523 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms