RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 BCAR1P56945 870 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 MAP3K12Q12852 859 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 UBXN11Q5T124 520 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 ZFYVE27Q5T4F4 411 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 FRMD7Q6ZUT3 714 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 DDX42Q86XP3 938 aaKnown RBP eCLIP7.41□□□□□ -1.22
HDAC9-213ENST00000433709 OR5AN1Q8NGI8 311 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 WDR66Q8TBY9 1149 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
HDAC9-213ENST00000433709 TEPSINQ96N21 525 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 TESK2Q96S53 571 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 KRTAP9-9Q9BYP9 154 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 ANO3Q9BYT9 981 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 KIAA1683Q9H0B3 1180 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 MTG2Q9H4K7 406 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 VTA1Q9NP79 307 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 TOPORSQ9NS56 1045 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-213ENST00000433709 KCMF1Q9P0J7 381 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 USP36Q9P275 1121 aaKnown RBP7.41□□□□□ -1.22
HDAC9-213ENST00000433709 ANKRD36BQ8N2N9 1353 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 USP47Q96K76 1375 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
HDAC9-213ENST00000433709 GPR39O43194 453 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 KDM1AO60341 852 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 ULK1O75385 1050 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 IL2RBP14784 551 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 AMPHP49418 695 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 PCOLCEQ15113 449 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 PDCD1Q15116 288 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 CXorf67Q86X51 503 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-213ENST00000433709 IP6K1Q92551 441 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 CAMKK2Q96RR4 588 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 RTEL1Q9NZ71 1219 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 SAE1Q9UBE0 346 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-213ENST00000433709 CGNL1Q0VF96 1302 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 A0A1W2PP64 1363 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 KIF24Q5T7B8 1368 aa7.4□□□□□ -1.22
HDAC9-213ENST00000433709 PIK3C2AO00443 1686 aa7.4□□□□□ -1.23
HDAC9-213ENST00000433709 MON2Q7Z3U7 1717 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 PARP4Q9UKK3 1724 aaKnown RBP7.39□□□□□ -1.23
HDAC9-213ENST00000433709 SMG6Q86US8 1419 aaKnown RBP7.39□□□□□ -1.23
HDAC9-213ENST00000433709 RTL1A6NKG5 1358 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 PRSS38A1L453 326 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 PCDH8O95206 1070 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 CLEC2LP0C7M8 214 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 MRE11P49959 708 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 CTSWP56202 376 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 SESN3P58005 492 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 AMPD3Q01432 767 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 NFIXQ14938 502 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 TBR1Q16650 682 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 DGKDQ16760 1214 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 PLEKHH3Q7Z736 793 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 RTKN2Q8IZC4 609 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 COG1Q8WTW3 980 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 FERMT2Q96AC1 680 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 PTPN18Q99952 460 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 PCGF6Q9BYE7 350 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 ATP8A1Q9Y2Q0 1164 aa7.39□□□□□ -1.23
HDAC9-213ENST00000433709 MYPNQ86TC9 1320 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 A0A0A6YYJ9 748 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 CNOT4O95628 575 aaKnown RBP7.38□□□□□ -1.23
HDAC9-213ENST00000433709 MEOX1P50221 254 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 PPP2CBP62714 309 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 PPP2CAP67775 309 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 EZH2Q15910 746 aaKnown RBP7.38□□□□□ -1.23
HDAC9-213ENST00000433709 ZNF827Q17R98 1081 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 TBC1D10BQ4KMP7 808 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-213ENST00000433709 IQSEC1Q6DN90 963 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 ARHGEF18Q6ZSZ5 1173 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 CMIPQ8IY22 773 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 DYDC2Q96IM9 177 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 PITHD1Q9GZP4 211 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-213ENST00000433709 RAPGEFL1Q9UHV5 662 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 DENND2AQ9ULE3 1009 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 FAM184BQ9ULE4 1060 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 PPP2R3BQ9Y5P8 575 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 SLC4A7Q9Y6M7 1214 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 USP54Q70EL1 1684 aa7.38□□□□□ -1.23
HDAC9-213ENST00000433709 NFAT5O94916 1531 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 CD163L1Q9NR16 1453 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 ZNF536O15090 1300 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 ANKRD62A6NC57 917 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 LAMTOR5O43504 91 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 OPHN1O60890 802 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 RNF151Q2KHN1 245 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 AGBL4Q5VU57 503 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 BMP8AQ7Z5Y6 402 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 NOL10Q9BSC4 688 aaKnown RBP7.37□□□□□ -1.23
HDAC9-213ENST00000433709 PRDM12Q9H4Q4 367 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 JADE2Q9NQC1 790 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 DNAI1Q9UI46 699 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 MCM8Q9UJA3 840 aa7.37□□□□□ -1.23
HDAC9-213ENST00000433709 BTBD11A6QL63 1104 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 PRKD3O94806 890 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 PLATP00750 562 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 PFKMP08237 780 aa7.36□□□□□ -1.23
HDAC9-213ENST00000433709 MANFP55145 182 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms