RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ANO6Q4KMQ2 910 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 NKAPLQ5M9Q1 402 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 FAM83BQ5T0W9 1011 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 PRAMEF9Q5VWM5 478 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 PPP4R3AQ6IN85 833 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 MIB1Q86YT6 1006 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 LYSMD2Q8IV50 215 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 GRAMD1CQ8IYS0 662 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 CAMKK1Q8N5S9 505 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 CDYL2Q8N8U2 506 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 TSPEARQ8WU66 669 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 PGBD4Q96DM1 585 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 PKNOX2Q96KN3 472 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 PTPN18Q99952 460 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 KMT5AQ9NQR1 393 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 SERPINB13Q9UIV8 391 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 INTUQ9ULD6 942 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 L1RE1Q9UN81 338 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 EDARQ9UNE0 448 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 FAM50BQ9Y247 325 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 CFAP20Q9Y6A4 193 aaKnown RBP5.01□□□□□ -1.61
HMGB3-203ENST00000430118 ANKRD30BQ9BXX2 1392 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 PARP4Q9UKK3 1724 aaKnown RBP5□□□□□ -1.61
HMGB3-203ENST00000430118 ALS2Q96Q42 1657 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 A6NNZ2 444 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 FOXN3O00409 490 aaPredicted RBP5□□□□□ -1.61
HMGB3-203ENST00000430118 FRS3O43559 492 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 UBXN7O94888 489 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 SETSIPP0DME0 302 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 SLC5A1P13866 664 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 RAC2P15153 192 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 ZKSCAN1P17029 563 aaPredicted RBP5□□□□□ -1.61
HMGB3-203ENST00000430118 GDNFP39905 211 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 ALDH5A1P51649 535 aaPredicted RBP5□□□□□ -1.61
HMGB3-203ENST00000430118 LGALS4P56470 323 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 ERVFRD-1P60508 538 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 SLC6A3Q01959 620 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 INO80DQ53TQ3 878 aaPredicted RBP5□□□□□ -1.61
HMGB3-203ENST00000430118 ERAP2Q6P179 960 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 FAM180AQ6UWF9 173 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 CCDC149Q6ZUS6 474 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 VSIG10LQ86VR7 867 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 FAM126BQ8IXS8 530 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 TCP11L2Q8N4U5 519 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 ARRDC4Q8NCT1 418 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 FAM156AQ8NDB6 213 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 ACRBPQ8NEB7 543 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 HDAC10Q969S8 669 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 NAA15Q9BXJ9 866 aaKnown RBP5□□□□□ -1.61
HMGB3-203ENST00000430118 BTBD1Q9H0C5 482 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 NUP62CLQ9H1M0 184 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 SEMA6BQ9H3T3 888 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 STK26Q9P289 416 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 ARHGAP28Q9P2N2 729 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 DPP7Q9UHL4 492 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 DAAM1Q9Y4D1 1078 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 IPPQ9Y573 584 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 PCDHB6Q9Y5E3 794 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 AATKQ6ZMQ8 1374 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 KIAA0232Q92628 1395 aa5□□□□□ -1.61
HMGB3-203ENST00000430118 TRPM3Q9HCF6 1732 aaPredicted RBP5□□□□□ -1.61
HMGB3-203ENST00000430118 TOPAZ1Q8N9V7 1692 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 YTHDC2Q9H6S0 1430 aaKnown RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 PHRF1Q9P1Y6 1649 aaKnown RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 A0A0A6YYJ9 748 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 ABHD14A-ACY1A0A1B0GW23 586 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 PRAMEF22A3QJZ6 481 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 CAPN8A6NHC0 703 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 FAM171A2A8MVW0 826 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 HTRA2O43464 458 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 MPIG6BO95866 241 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 FGAP02671 866 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 LPLP06858 475 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 ENO2P09104 434 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 CD8BP10966 210 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 GPSM2P81274 684 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 MEF2AQ02078 507 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 POU5F1BQ06416 359 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 NFATC3Q12968 1075 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 TRIM25Q14258 630 aaKnown RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 ADRM1Q16186 407 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 SLC15A2Q16348 729 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 MUM1L1Q5H9M0 696 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 PRAMEF18Q5VWM3 479 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 CD276Q5ZPR3 534 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 BTNL9Q6UXG8 535 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 MIGA2Q7L4E1 593 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 APBB1IPQ7Z5R6 666 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 SRLQ86TD4 932 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 DPP9Q86TI2 863 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 SAPCD2Q86UD0 394 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 ERCC4Q92889 916 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 TOE1Q96GM8 510 aaKnown RBP4.99□□□□□ -1.61
HMGB3-203ENST00000430118 HERPUD2Q9BSE4 406 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 BTBD2Q9BX70 525 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 GREM2Q9H772 168 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 INCENPQ9NQS7 918 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 KCMF1Q9P0J7 381 aa4.99□□□□□ -1.61
HMGB3-203ENST00000430118 SCOCQ9UIL1 159 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms