RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ST3GAL5Q9UNP4 418 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 TNFSF13BQ9Y275 285 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 FRMD4BQ9Y2L6 1034 aa8.64□□□□□ -1.03
HMGA1P4-201ENST00000428643 PDE4DIPQ5VU43 2346 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 KCNJ18B7U540 433 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 KIAA0391O15091 583 aaKnown RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 SLC16A3O15427 465 aaKnown RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 EXTL3O43909 919 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 GNA14O95837 355 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 MCF2P10911 925 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 CDK11BP21127 795 aaKnown RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 PROZP22891 400 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 AXLP30530 894 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 HOXA11P31270 313 aaPredicted RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 PSMC2P35998 433 aaKnown RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 OSTNP61366 133 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 PLCB2Q00722 1185 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 MCL1Q07820 350 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 MYBPC2Q14324 1141 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 KCNJ12Q14500 433 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 SNRNP35Q16560 246 aaKnown RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 NFIL3Q16649 462 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 CDKAL1Q5VV42 579 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 SLC27A1Q6PCB7 646 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 C12orf56Q8IXR9 622 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZC3H3Q8IXZ2 948 aaKnown RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 FAM186BQ8IYM0 893 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 THNSL1Q8IYQ7 743 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 SEPT8Q92599 483 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 APOL6Q9BWW8 343 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 SAMSN1Q9NSI8 373 aaKnown RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 ARMCX3Q9UH62 379 aaPredicted RBP8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 PADI3Q9ULW8 664 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 SQORQ9Y6N5 450 aa8.63□□□□□ -1.03
HMGA1P4-201ENST00000428643 A0A1B0GUA9 196 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 TRIM43BA6NCK2 446 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 PES1O00541 588 aaKnown RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 ABLIM1O14639 778 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 KIAA0355O15063 1070 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 OGTO15294 1046 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 NBNO60934 754 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 AKAP3O75969 853 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 PARNO95453 639 aaKnown RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 TIMP1P01033 207 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 TPM2P07951 284 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 KRT13P13646 458 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZSCAN20P17040 1043 aaPredicted RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 EEF1GP26641 437 aaKnown RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 RFC2P35250 354 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 MTIF2P46199 727 aaKnown RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 CASP4P49662 377 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 ACOT2P49753 483 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 SPAG1Q07617 926 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 GSE1Q14687 1217 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 SEZ6Q53EL9 994 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 DCAF17Q5H9S7 520 aaPredicted RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZBTB41Q5SVQ8 909 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 DEFB128Q7Z7B8 93 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 CBWD2Q8IUF1 395 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 HACE1Q8IYU2 909 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 GPD1LQ8N335 351 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 RNF169Q8NCN4 708 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 TRIM43Q96BQ3 446 aaPredicted RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 CCDC94Q9BW85 323 aaPredicted RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 EIF2AQ9BY44 585 aaKnown RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 OSBPL7Q9BZF2 842 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 HAPLN2Q9GZV7 340 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 NXF3Q9H4D5 531 aaKnown RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 KIAA1586Q9HCI6 787 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 PTPRHQ9HD43 1115 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 CHST12Q9NRB3 414 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 DMAC2Q9NW81 257 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 TAB2Q9NYJ8 693 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 RBAKQ9NYW8 714 aaPredicted RBP8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 STYXL1Q9Y6J8 313 aa8.62□□□□□ -1.03
HMGA1P4-201ENST00000428643 KIAA0100Q14667 2235 aaKnown RBP8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZNF233A6NK53 670 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 EVI5O60447 810 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 LDHAP00338 332 aaKnown RBP8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 SERPINC1P01008 464 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 ADRB2P07550 413 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 CLTAP09496 248 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 ATP1A3P13637 1013 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZNF18P17022 549 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 GRM5P41594 1212 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 RAB27AP51159 221 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 KYAT1Q16773 422 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 PLEKHG4Q58EX7 1191 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 TCP11X2Q5H9J9 407 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 TCERG1LQ5VWI1 586 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 INTS8Q75QN2 995 aaKnown RBP8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 USP37Q86T82 979 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 IRF2BP1Q8IU81 584 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 TMEM199Q8N511 208 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 CEP120Q8N960 986 aa8.61□□□□□ -1.03
HMGA1P4-201ENST00000428643 ZSWIM2Q8NEG5 633 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms