RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 CNR2P34972 360 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 SREBF1P36956 1147 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 UGCGQ16739 394 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 ZNF746Q6NUN9 644 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-208ENST00000428098 CATSPER4Q7RTX7 472 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 HEATR3Q7Z4Q2 680 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 CLSTN3Q9BQT9 956 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 RIC8AQ9NPQ8 531 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 DIAPH3Q9NSV4 1193 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 DNMT3BQ9UBC3 853 aaKnown RBP13.41□□□□□ -0.26
DDX39B-208ENST00000428098 FBXW11Q9UKB1 542 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
DDX39B-208ENST00000428098 LOC400499M0QZD8 3231 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 IGKV6-21A0A0C4DH24 114 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 TMEM150BA6NC51 233 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 E7EWF7 191 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 MAN2B1O00754 1011 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 STBD1O95210 358 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 FOSP01100 380 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-208ENST00000428098 HNRNPA1P09651 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX39B-208ENST00000428098 PPP2R5DQ14738 602 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 WWC2Q6AWC2 1192 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 LONP2Q86WA8 852 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 RAB11FIP4Q86YS3 637 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-208ENST00000428098 SMG8Q8ND04 991 aaKnown RBP13.4□□□□□ -0.26
DDX39B-208ENST00000428098 CRYGNQ8WXF5 182 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 FAM3CQ92520 227 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 FAM167AQ96KS9 214 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 SH2D3AQ9BRG2 576 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 ZNF577Q9BSK1 485 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 ADAM33Q9BZ11 813 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX39B-208ENST00000428098 BPTFQ12830 3046 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
DDX39B-208ENST00000428098 TMEM8BA6NDV4 472 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 ADAMTS3O15072 1205 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 ADAM12O43184 909 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 DDAH1O94760 285 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 C8AP07357 584 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 GNAQP50148 359 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 PRKCEQ02156 737 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 USP41Q3LFD5 358 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 WDR44Q5JSH3 913 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 PLA2G2CQ5R387 149 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 PPM1LQ5SGD2 360 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 FUT10Q6P4F1 479 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 CEP68Q76N32 757 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 SMAP1Q8IYB5 467 aaPredicted RBP13.39□□□□□ -0.27
DDX39B-208ENST00000428098 GPR65Q8IYL9 337 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 GAD1Q99259 594 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 IER2Q9BTL4 223 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 MINDY3Q9H8M7 445 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 IFT122Q9HBG6 1241 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 TBC1D22BQ9NU19 505 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
DDX39B-208ENST00000428098 CNTNAP2Q9UHC6 1331 aa13.39□□□□□ -0.27
DDX39B-208ENST00000428098 ARL5CA6NH57 179 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 FCARP24071 287 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 NOVA1P51513 510 aaKnown RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 CDC42EP1Q00587 391 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 PTH1RQ03431 593 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 GRM2Q14416 872 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 SLC5A9Q2M3M2 681 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 RHPN2Q8IUC4 686 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 SPEM1Q8N4L4 309 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 ZCCHC14Q8WYQ9 949 aaKnown RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 ELSPBP1Q96BH3 223 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 ZFP42Q96MM3 310 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 SCNM1Q9BWG6 230 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 COLEC11Q9BWP8 271 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 LNPKQ9C0E8 428 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 SUCLA2Q9P2R7 463 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-208ENST00000428098 KCNH3Q9ULD8 1083 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 WDR81Q562E7 1941 aa13.38□□□□□ -0.27
DDX39B-208ENST00000428098 CYSRT1A8MQ03 144 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 CYP3A4P08684 503 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 RAP1GAPP47736 663 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 SCNN1GP51170 649 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
DDX39B-208ENST00000428098 TCEAL6Q6IPX3 200 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 ZNF410Q86VK4 478 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 MAP4K3Q8IVH8 894 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 GSTCDQ8NEC7 633 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 LNX1Q8TBB1 728 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-208ENST00000428098 TCEAL3Q969E4 200 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 NIFKQ9BYG3 293 aaKnown RBP13.37□□□□□ -0.27
DDX39B-208ENST00000428098 BRD9Q9H8M2 597 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-208ENST00000428098 DISC1Q9NRI5 854 aa13.37□□□□□ -0.27
DDX39B-208ENST00000428098 CACNG4Q9UBN1 327 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms