RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 A0A1W2PPC1 479 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 ANKRD63C9JTQ0 380 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 YARSP54577 528 aaKnown RBP16.55■□□□□ 0.24
VARS2-203ENST00000428017 SNRPFP62306 86 aaKnown RBP16.55■□□□□ 0.24
VARS2-203ENST00000428017 MORC3Q14149 939 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
VARS2-203ENST00000428017 NFKBIBQ15653 356 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 KYAT1Q16773 422 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 ARMCX5Q6P1M9 558 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 GLB1LQ6UWU2 654 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 THNSL1Q8IYQ7 743 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 SMYD4Q8IYR2 804 aaPredicted RBP16.55■□□□□ 0.24
VARS2-203ENST00000428017 YME1L1Q96TA2 773 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 NXF3Q9H4D5 531 aaKnown RBP16.55■□□□□ 0.24
VARS2-203ENST00000428017 CGNQ9P2M7 1197 aaKnown RBP16.55■□□□□ 0.24
VARS2-203ENST00000428017 PARP2Q9UGN5 583 aa16.55■□□□□ 0.24
VARS2-203ENST00000428017 COLQQ9Y215 455 aaPredicted RBP16.55■□□□□ 0.24
VARS2-203ENST00000428017 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 TISP43B9A030 160 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 PSMA7O14818 248 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 CALUO43852 315 aaPredicted RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 TLL1O43897 1013 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 GJB5O95377 273 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 GARTP22102 1010 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 OSTNP61366 133 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 SLC39A4Q6P5W5 647 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 SASS6Q6UVJ0 657 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 TMCO2Q7Z6W1 182 aaPredicted RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 ZNF598Q86UK7 904 aaKnown RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 SMG8Q8ND04 991 aaKnown RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 NOC3LQ8WTT2 800 aaKnown RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 LPPQ93052 612 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 ACAP3Q96P50 834 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 TSG101Q99816 390 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 IKZF4Q9H2S9 585 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 PRO3102Q9H379 93 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 RSAD1Q9HA92 442 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 TOPORSQ9NS56 1045 aaPredicted RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 SNTG2Q9NY99 539 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 AGO2Q9UKV8 859 aaKnown RBP16.54■□□□□ 0.24
VARS2-203ENST00000428017 HES2Q9Y543 173 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 STYXL1Q9Y6J8 313 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
VARS2-203ENST00000428017 A0A0B4J269 797 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 PDXKO00764 312 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 ABLIM1O14639 778 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 KIAA0391O15091 583 aaKnown RBP16.53■□□□□ 0.24
VARS2-203ENST00000428017 OGTO15294 1046 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 LDHAP00338 332 aaKnown RBP16.53■□□□□ 0.24
VARS2-203ENST00000428017 FGFR1P11362 822 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 AKAP5P24588 427 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 HOXD13P35453 343 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 GRM5P41594 1212 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 PRCPP42785 496 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 COBLL1Q53SF7 1204 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 ADSSL1Q8N142 457 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 URGCPQ8TCY9 931 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 RSPH1Q8WYR4 309 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 RPS6KC1Q96S38 1066 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 AGPAT3Q9NRZ7 376 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 TMEM63CQ9P1W3 806 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 DACH1Q9UI36 760 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 MSRAQ9UJ68 235 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 GIT1Q9Y2X7 761 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 INSL6Q9Y581 213 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 MYH11P35749 1972 aa16.53■□□□□ 0.24
VARS2-203ENST00000428017 ZMYM2Q9UBW7 1377 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
VARS2-203ENST00000428017 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 DGKIO75912 1065 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 LETM1O95202 739 aaPredicted RBP16.52■□□□□ 0.24
VARS2-203ENST00000428017 CLTAP09496 248 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 ATF7P17544 494 aaPredicted RBP16.52■□□□□ 0.24
VARS2-203ENST00000428017 CYP2J2P51589 502 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 RAB30Q15771 203 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 AGMOQ6ZNB7 445 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 HELQQ8TDG4 1101 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 DHTKD1Q96HY7 919 aaPredicted RBP16.52■□□□□ 0.24
VARS2-203ENST00000428017 RAD9AQ99638 391 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 CBWD1Q9BRT8 395 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 MRPL9Q9BYD2 267 aaKnown RBP16.52■□□□□ 0.24
VARS2-203ENST00000428017 TMEM117Q9H0C3 514 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 PCIF1Q9H4Z3 704 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 INPP5FQ9Y2H2 1132 aa16.52■□□□□ 0.24
VARS2-203ENST00000428017 TET1Q8NFU7 2136 aa16.52■□□□□ 0.23
VARS2-203ENST00000428017 CEP290O15078 2479 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 TBKBP1A7MCY6 615 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 GRXCR1A8MXD5 290 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 CLIC2O15247 247 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 RECQL4O94761 1208 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 ADSSP30520 456 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 NLRP12P59046 1061 aa16.51■□□□□ 0.23
VARS2-203ENST00000428017 BTG3Q14201 252 aaPredicted RBP16.51■□□□□ 0.23
VARS2-203ENST00000428017 PAN2Q504Q3 1202 aaKnown RBP16.51■□□□□ 0.23
VARS2-203ENST00000428017 SEZ6Q53EL9 994 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms