RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 FGFR1P11362 822 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 NCKAP1LP55160 1127 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 GRIK3Q13003 919 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 ALCAMQ13740 583 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 KCNC3Q14003 757 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 DDX53Q86TM3 631 aaKnown RBP10.06□□□□□ -0.8
SMC1A-203ENST00000428014 EFHBQ8N7U6 833 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 POF1BQ8WVV4 589 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 LARP4BQ92615 738 aaKnown RBP10.06□□□□□ -0.8
SMC1A-203ENST00000428014 RAD54LQ92698 747 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 TMEM169Q96HH4 297 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 PPP1R16BQ96T49 567 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 MRPL4Q9BYD3 311 aaKnown RBP10.06□□□□□ -0.8
SMC1A-203ENST00000428014 TRIM6Q9C030 488 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-203ENST00000428014 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 TOPORSQ9NS56 1045 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-203ENST00000428014 BLOC1S4Q9NUP1 217 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 PRKAG3Q9UGI9 489 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 EYSQ5T1H1 3165 aa10.06□□□□□ -0.8
SMC1A-203ENST00000428014 RFXAPO00287 272 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 CUTAO60888 179 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 CSDE1O75534 798 aaKnown RBP10.05□□□□□ -0.8
SMC1A-203ENST00000428014 TOM1L1O75674 476 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 F13A1P00488 732 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 ALDH2P05091 517 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 GALTP07902 379 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 MCF2P10911 925 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 BMP1P13497 986 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 HOXB8P17481 243 aaPredicted RBP10.05□□□□□ -0.8
SMC1A-203ENST00000428014 FGFR4P22455 802 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 BCAR1P56945 870 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 CREMQ03060 361 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 COASYQ13057 564 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 ADAM15Q13444 863 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 CYP26C1Q6V0L0 522 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 RTL10Q7L3V2 364 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 SPRED2Q7Z698 418 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 PPFIBP1Q86W92 1011 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 THNSL1Q8IYQ7 743 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 TMEM161BQ8NDZ6 487 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 GSTCDQ8NEC7 633 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 HELQQ8TDG4 1101 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 BSNDQ8WZ55 320 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 IGSF21Q96ID5 467 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 USP28Q96RU2 1077 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 PDZD7Q9H5P4 517 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 NRDE2Q9H7Z3 1164 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 UBE2ZQ9H832 354 aaPredicted RBP10.05□□□□□ -0.8
SMC1A-203ENST00000428014 CERS4Q9HA82 394 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 PLEKHA5Q9HAU0 1116 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 PARVGQ9HBI0 331 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 KMT5AQ9NQR1 393 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 DPP7Q9UHL4 492 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 MYH11P35749 1972 aa10.05□□□□□ -0.8
SMC1A-203ENST00000428014 BDP1A6H8Y1 2624 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 MYH15Q9Y2K3 1946 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 FRMD3A2A2Y4 597 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 PP2D1A8MPX8 630 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 SPTLC2O15270 562 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 MYL1P05976 194 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ADRB2P07550 413 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 CTSAP10619 480 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 GAP43P17677 238 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 PLCG1P19174 1290 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 CDC25AP30304 524 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 GRM5P41594 1212 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 GTF2BQ00403 316 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ELAVL2Q12926 359 aaKnown RBP10.04□□□□□ -0.8
SMC1A-203ENST00000428014 BECN1Q14457 450 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
SMC1A-203ENST00000428014 DUSP6Q16828 381 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ARSHQ5FYA8 562 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 TCEAL5Q5H9L2 206 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ATF7IP2Q5U623 682 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 PDXDC1Q6P996 788 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ALKAL1Q6UXT8 129 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 MRPL43Q8N983 215 aaKnown RBP10.04□□□□□ -0.8
SMC1A-203ENST00000428014 HDAC7Q8WUI4 952 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
SMC1A-203ENST00000428014 UROC1Q96N76 676 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ACO2Q99798 780 aaKnown RBP10.04□□□□□ -0.8
SMC1A-203ENST00000428014 RUSC1Q9BVN2 902 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMC1A-203ENST00000428014 SLC38A7Q9NVC3 462 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 RCOR1Q9UKL0 485 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 MTUS1Q9ULD2 1270 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 CLIC4Q9Y696 253 aa10.04□□□□□ -0.8
SMC1A-203ENST00000428014 ABLIM1O14639 778 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 KIAA0391O15091 583 aaKnown RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 SOD2P04179 222 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 KCNE1P15382 129 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 PEX3P56589 373 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 AMPD3Q01432 767 aa10.03□□□□□ -0.8
SMC1A-203ENST00000428014 RNASELQ05823 741 aaKnown RBP10.03□□□□□ -0.8
SMC1A-203ENST00000428014 MCL1Q07820 350 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms