RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 LCP1P13796 627 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 RAG1P15918 1043 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 NCF2P19878 526 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 CDC27P30260 824 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 MAPK9P45984 424 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PLCL1Q15111 1095 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PPP6R3Q5H9R7 873 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 SWSAP1Q6NVH7 229 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 LLGL2Q6P1M3 1020 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 TRMT10CQ7L0Y3 403 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 C10orf53Q8N6V4 93 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 DNAJC1Q96KC8 554 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 ZC4H2Q9NQZ6 224 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 ZBTB1Q9Y2K1 713 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 NFE2L3Q9Y4A8 694 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 UGGT1Q9NYU2 1555 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 AP3B1O00203 1094 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 C2CD2LO14523 706 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SRGAP2O75044 1071 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 CD4P01730 458 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 EPB42P16452 691 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 ARHGAP25P42331 645 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SULT1E1P49888 294 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 HSD17B4P51659 736 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 GUCY2FP51841 1108 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 G2E3Q7L622 706 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 KRT78Q8N1N4 520 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 NBPF15Q8N660 670 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 FBXO18Q8NFZ0 1043 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 MAGOHBQ96A72 148 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 CABS1Q96KC9 395 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 NEUROD4Q9HD90 331 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PSD3Q9NYI0 1048 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 GTSE1Q9NYZ3 720 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PCDHGA4Q9Y5G9 962 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SNX14Q9Y5W7 946 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 ATP10BO94823 1461 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 LRRN2O75325 713 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 RPLP2P05387 115 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 CCDC159P0C7I6 412 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PLA2G4BP0C869 781 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 CKBP12277 381 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PHKA1P46020 1223 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 ESRRGP62508 458 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 EZH2Q15910 746 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 TXNRD1Q16881 649 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SV2CQ496J9 727 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 CCDC184Q52MB2 194 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 C10orf76Q5T2E6 689 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SNX30Q5VWJ9 437 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 RGL4Q8IZJ4 473 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 OR8K1Q8NGG5 319 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SPATA18Q8TC71 538 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 CNOT6LQ96LI5 555 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 PPP1R2P1Q96PQ5 205 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SIK2Q9H0K1 926 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 EML4Q9HC35 981 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 MRPL40Q9NQ50 206 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 H2AFY2Q9P0M6 372 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 SAE1Q9UBE0 346 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 SLC39A10Q9ULF5 831 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 MAST1Q9Y2H9 1570 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PFASO15067 1338 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 A0A0G2JLW4 131 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 EFCAB8A8MWE9 144 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 E9PMD0 336 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 GRK2P25098 689 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TRPC1P48995 793 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 EPHB3P54753 998 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 CES5AQ6NT32 575 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 ACAD11Q709F0 780 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 ITIH5Q86UX2 942 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 ANKRD13BQ86YJ7 626 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TEX9Q8N6V9 391 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TSPYL6Q8N831 410 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 MRPS31Q92665 395 aaKnown RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 VPS50Q96JG6 964 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 CCDC3Q9BQI4 270 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 TUBB6Q9BUF5 446 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 COPS7BQ9H9Q2 264 aaPredicted RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 TARSL2A2RTX5 802 aaKnown RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 RRN3P2A6NIE6 340 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 GOLGA8KD6RF30 607 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 GTF2E2P29084 291 aaKnown RBP6.06□□□□□ -1.44
HERC4-206ENST00000427635 SDC4P31431 198 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 IL13P35225 146 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 AARSP49588 968 aaKnown RBP eCLIP6.06□□□□□ -1.44
HERC4-206ENST00000427635 RASSF7Q02833 373 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 HIF1AQ16665 826 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 ALFQ53S48 1182 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 RCSD1Q6JBY9 416 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PARP9Q8IXQ6 854 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 AIPL1Q9NZN9 384 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 RPS6KB2Q9UBS0 482 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 CAPN11Q9UMQ6 739 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 GPR182O15218 404 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 SUPT3HO75486 399 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 SUN1O94901 812 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 PLS3P13797 630 aa6.06□□□□□ -1.44
HERC4-206ENST00000427635 SLC9A1P19634 815 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms