RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 KIAA0754O94854 1291 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 YWHABP31946 246 aaKnown RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 IRX1P78414 480 aaPredicted RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 PPATQ06203 517 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 INTS8Q75QN2 995 aaKnown RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 CPNE8Q86YQ8 564 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 ZDHHC14Q8IZN3 488 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 CD248Q9HCU0 757 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 SLC16A4O15374 487 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 MARCKSL1P49006 195 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 RARRES1P49788 294 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 VAMP7P51809 220 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 CCNHP51946 323 aaPredicted RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 RPS6P62753 249 aaKnown RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 TNFAIP1Q13829 316 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 NFIL3Q16649 462 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 KRT71Q3SY84 523 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 DAW1Q8N136 415 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 LPAR1Q92633 364 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 TXLNGYQ9BZA5 131 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 TMEM165Q9HC07 324 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 AGO4Q9HCK5 861 aaKnown RBP13.97□□□□□ -0.17
COL12A1-205ENST00000425443 TBC1D22BQ9NU19 505 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 CTTNBP2NLQ9P2B4 639 aa13.97□□□□□ -0.17
COL12A1-205ENST00000425443 ZNF536O15090 1300 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 GMNCA6NCL1 334 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 A6NNZ2 444 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 TUBB8Q3ZCM7 444 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 HAUS6Q7Z4H7 955 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 PHLDB2Q86SQ0 1253 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 XXYLT1Q8NBI6 393 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
COL12A1-205ENST00000425443 KAT5Q92993 513 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 CBWD1Q9BRT8 395 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 DMAC2Q9NW81 257 aa13.96□□□□□ -0.17
COL12A1-205ENST00000425443 A0A0A6YYK5 440 aaPredicted RBP13.96□□□□□ -0.18
COL12A1-205ENST00000425443 SORBS3O60504 671 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 PLS3P13797 630 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 PPP2R2AP63151 447 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 SP4Q02446 784 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 ACTN3Q08043 901 aaPredicted RBP13.96□□□□□ -0.18
COL12A1-205ENST00000425443 MAPK7Q13164 816 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 MTMR2Q13614 643 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 RNF207Q6ZRF8 634 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 EIF1ADQ8N9N8 165 aaKnown RBP13.96□□□□□ -0.18
COL12A1-205ENST00000425443 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 LRRC45Q96CN5 670 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 MTFR1LQ9H019 292 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.18
COL12A1-205ENST00000425443 GPRC5CQ9NQ84 441 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 ZDHHC18Q9NUE0 388 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 INTUQ9ULD6 942 aa13.96□□□□□ -0.18
COL12A1-205ENST00000425443 PLTPP55058 493 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 ADCY2Q08462 1091 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 ALCAMQ13740 583 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 PCNX4Q63HM2 1172 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 PHLDB3Q6NSJ2 640 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 YTHDF3Q7Z739 585 aaKnown RBP13.95□□□□□ -0.18
COL12A1-205ENST00000425443 CLEC4DQ8WXI8 215 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 BTBD6Q96KE9 485 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 TSPAN18Q96SJ8 248 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 SNX24Q9Y343 169 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 UTP11Q9Y3A2 253 aaKnown RBP13.95□□□□□ -0.18
COL12A1-205ENST00000425443 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
COL12A1-205ENST00000425443 CCDC188H7C350 402 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 CALCAP01258 141 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 OATP04181 439 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 SMTNP53814 917 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
COL12A1-205ENST00000425443 MESDQ14696 234 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 PLA2G4FQ68DD2 849 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 HSPBP1Q9NZL4 362 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 SKAP2O75563 359 aaPredicted RBP13.95□□□□□ -0.18
COL12A1-205ENST00000425443 NPEPPSP55786 919 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 MTMR14Q8NCE2 650 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL12A1-205ENST00000425443 RFFLQ8WZ73 363 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 KRT35Q92764 455 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 C18orf8Q96DM3 657 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 CAMKK2Q96RR4 588 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 SLITRK6Q9H5Y7 841 aa13.95□□□□□ -0.18
COL12A1-205ENST00000425443 RPAP3Q9H6T3 665 aaPredicted RBP13.95□□□□□ -0.18
COL12A1-205ENST00000425443 ANKRD33BA6NCL7 494 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 NCANO14594 1321 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 SPP2Q13103 211 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 B3GNT9Q6UX72 402 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 ZDHHC24Q6UX98 284 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 SLC9A9Q8IVB4 645 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 KIRREL3Q8IZU9 778 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 CCDC26Q8TAB7 109 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 N4BP2L2Q92802 583 aaPredicted RBP13.94□□□□□ -0.18
COL12A1-205ENST00000425443 RNF25Q96BH1 459 aaPredicted RBP13.94□□□□□ -0.18
COL12A1-205ENST00000425443 SEC16BQ96JE7 1060 aa13.94□□□□□ -0.18
COL12A1-205ENST00000425443 CCDC113Q9H0I3 377 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms