RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TTI1O43156 1089 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 DAPK3O43293 454 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 CCDC172P0C7W6 258 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 COPB2P35606 906 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 FKBP1BP68106 108 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 ZNF211Q13398 564 aaPredicted RBP11.52□□□□□ -0.57
CUX1-205ENST00000425244 NFIL3Q16649 462 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.57
CUX1-205ENST00000425244 SLFN11Q7Z7L1 901 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 RIOX2Q8IUF8 465 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 ZSWIM2Q8NEG5 633 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 RIT2Q99578 217 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 PTPN18Q99952 460 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 LARSQ9P2J5 1176 aaKnown RBP11.52□□□□□ -0.57
CUX1-205ENST00000425244 CHORDC1Q9UHD1 332 aaPredicted RBP11.52□□□□□ -0.57
CUX1-205ENST00000425244 STXBP5LQ9Y2K9 1186 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 LOC285556D6RIA3 1793 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 GOLGA8IPA6NC78 632 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 GOLGA8JA6NMD2 632 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 CCND2P30279 289 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 HPDP32754 393 aaPredicted RBP11.51□□□□□ -0.57
CUX1-205ENST00000425244 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
CUX1-205ENST00000425244 SEPT14Q6ZU15 432 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 CHST13Q8NET6 341 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 OLIG1Q8TAK6 271 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 NEUROG2Q9H2A3 272 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 RASSF4Q9H2L5 321 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 GPRC5CQ9NQ84 441 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 MAP3K20Q9NYL2 800 aaKnown RBP11.51□□□□□ -0.57
CUX1-205ENST00000425244 PNMA3Q9UL41 463 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 HTTP42858 3142 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 GOLGA6L10A6NI86 522 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 VAMP7P51809 220 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 CETN1Q12798 172 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 CUL1Q13616 776 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 ARHGEF19Q8IW93 802 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 MREGQ8N565 214 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
CUX1-205ENST00000425244 HES6Q96HZ4 224 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 CALR3Q96L12 384 aaKnown RBP11.51□□□□□ -0.57
CUX1-205ENST00000425244 NR2E1Q9Y466 385 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 GRIN2DO15399 1336 aa11.51□□□□□ -0.57
CUX1-205ENST00000425244 SLC16A4O15374 487 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 P4HBP07237 508 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 ZBTB48P10074 688 aaPredicted RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 BCRP11274 1271 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 MUTP22033 750 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 ECHS1P30084 290 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 HSD17B3P37058 310 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 GUCY1A3Q02108 690 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 B3GNT9Q6UX72 402 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 VSIG10LQ86VR7 867 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 KAT5Q92993 513 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 RNPC3Q96LT9 517 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 AGPAT1Q99943 283 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 TRIM51Q9BSJ1 452 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 CTTNBP2NLQ9P2B4 639 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 UBIAD1Q9Y5Z9 338 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 CCDC188H7C350 402 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 PPP1R37O75864 691 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 NR1D1P20393 614 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 CTNNA1P35221 906 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 FLT3P36888 993 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 RARRES1P49788 294 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 NPEPPSP55786 919 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 PEX3P56589 373 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 KCTD2Q14681 263 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 EP400NLQ6ZTU2 488 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 INTS8Q75QN2 995 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 CCDC26Q8TAB7 109 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 AGO4Q9HCK5 861 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 COG5Q9UP83 839 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 NCANO14594 1321 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 YWHABP31946 246 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 QARSP47897 775 aaKnown RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 GHRHRQ02643 423 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 FAM102BQ5T8I3 360 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 DCAF12L1Q5VU92 463 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 PLA2G4FQ68DD2 849 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 CCDC127Q96BQ5 260 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 MYCBPQ99417 103 aaPredicted RBP11.5□□□□□ -0.57
CUX1-205ENST00000425244 MMP19Q99542 508 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 KIFC3Q9BVG8 833 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 TMEM206Q9H813 350 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 TELO2Q9Y4R8 837 aa11.5□□□□□ -0.57
CUX1-205ENST00000425244 CCDC169A6NNP5 214 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 EBAG9O00559 213 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 NDUFAB1O14561 156 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 BACH1O14867 736 aa11.49□□□□□ -0.57
CUX1-205ENST00000425244 DHX15O43143 795 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms