RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 MLH1P40692 756 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
LINC01840-201ENST00000421870 PLPP4Q5VZY2 271 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 VPS52Q8N1B4 723 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 LRRC15Q8TF66 581 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 SPIRE2Q8WWL2 714 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 CALML4Q96GE6 196 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 GBP3Q9H0R5 595 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 ENTPD7Q9NQZ7 604 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 BLOC1S4Q9NUP1 217 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 TNFSF13BQ9Y275 285 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 PHLPP2Q6ZVD8 1323 aa16.34■□□□□ 0.21
LINC01840-201ENST00000421870 C5orf42Q9H799 3197 aa16.33■□□□□ 0.21
LINC01840-201ENST00000421870 NCOR1O75376 2440 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 C2orf71A6NGG8 1288 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 CXCL14O95715 111 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 CTSAP10619 480 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 IL9P15248 144 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 COASYQ13057 564 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 DMP1Q13316 513 aaPredicted RBP16.33■□□□□ 0.2
LINC01840-201ENST00000421870 GIT2Q14161 759 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 BMS1Q14692 1282 aaKnown RBP16.33■□□□□ 0.2
LINC01840-201ENST00000421870 EEF1DP3Q658K8 133 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 TAS1R3Q7RTX0 852 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 VN1R2Q8NFZ6 395 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 KCNN1Q92952 543 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 ADPGKQ9BRR6 497 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 APOL6Q9BWW8 343 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 VN1R3Q9BXE9 311 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 ZBP1Q9H171 429 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 PTPRHQ9HD43 1115 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 KMT5AQ9NQR1 393 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 FBXO2Q9UK22 296 aaPredicted RBP16.33■□□□□ 0.2
LINC01840-201ENST00000421870 FAM50BQ9Y247 325 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 MYH15Q9Y2K3 1946 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 TTC28Q96AY4 2481 aa16.33■□□□□ 0.2
LINC01840-201ENST00000421870 MBTPS2O43462 519 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 SSBP05455 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC01840-201ENST00000421870 PLS3P13797 630 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 DDIT3P35638 169 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 NDUFV1P49821 464 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 SCNN1GP51170 649 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 ATF7IP2Q5U623 682 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 USP49Q70CQ1 688 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 USP28Q96RU2 1077 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 ACO2Q99798 780 aaKnown RBP16.32■□□□□ 0.2
LINC01840-201ENST00000421870 SNTG2Q9NY99 539 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 KLK14Q9P0G3 267 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 PRKAG3Q9UGI9 489 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 CD207Q9UJ71 328 aa16.32■□□□□ 0.2
LINC01840-201ENST00000421870 LILRB3O75022 631 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 LIG1P18858 919 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 PLCG1P19174 1290 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
LINC01840-201ENST00000421870 OR1G1P47890 313 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 SMTNP53814 917 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 RAD51AP2Q09MP3 1159 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 GRIK3Q13003 919 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 SMAD4Q13485 552 aaKnown RBP16.31■□□□□ 0.2
LINC01840-201ENST00000421870 KARSQ15046 597 aaKnown RBP16.31■□□□□ 0.2
LINC01840-201ENST00000421870 SMAD2Q15796 467 aaKnown RBP16.31■□□□□ 0.2
LINC01840-201ENST00000421870 DCAF4L1Q3SXM0 396 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 HSCBQ8IWL3 235 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 RNF168Q8IYW5 571 aaPredicted RBP16.31■□□□□ 0.2
LINC01840-201ENST00000421870 SMRP1Q8NCR6 262 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 TMEM161BQ8NDZ6 487 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
LINC01840-201ENST00000421870 CD320Q9NPF0 282 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 MARCH5Q9NX47 278 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 LARSQ9P2J5 1176 aaKnown RBP16.31■□□□□ 0.2
LINC01840-201ENST00000421870 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
LINC01840-201ENST00000421870 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 SLC16A4O15374 487 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 NR1I2O75469 434 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 PROZP22891 400 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
LINC01840-201ENST00000421870 RBM10P98175 930 aaKnown RBP16.3■□□□□ 0.2
LINC01840-201ENST00000421870 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
LINC01840-201ENST00000421870 MCM6Q14566 821 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 RAD54LQ92698 747 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 TARS2Q9BW92 718 aaKnown RBP16.3■□□□□ 0.2
LINC01840-201ENST00000421870 COLEC11Q9BWP8 271 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 CXCL16Q9H2A7 254 aa16.3■□□□□ 0.2
LINC01840-201ENST00000421870 BARX2Q9UMQ3 279 aaPredicted RBP16.3■□□□□ 0.2
LINC01840-201ENST00000421870 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
LINC01840-201ENST00000421870 ABLIM1O14639 778 aa16.29■□□□□ 0.2
LINC01840-201ENST00000421870 PTGESO14684 152 aa16.29■□□□□ 0.2
LINC01840-201ENST00000421870 CLASP2O75122 1294 aaKnown RBP16.29■□□□□ 0.2
LINC01840-201ENST00000421870 RECQL4O94761 1208 aa16.29■□□□□ 0.2
LINC01840-201ENST00000421870 BRD1O95696 1058 aa16.29■□□□□ 0.2
LINC01840-201ENST00000421870 SOD2P04179 222 aa16.29■□□□□ 0.2
LINC01840-201ENST00000421870 THP07101 528 aa16.29■□□□□ 0.2
LINC01840-201ENST00000421870 MAPTP10636 758 aaKnown RBP16.29■□□□□ 0.2
LINC01840-201ENST00000421870 ZNF131P52739 623 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms