RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TMC5Q6UXY8 1006 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 C15orf39Q6ZRI6 1047 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 ALYREFQ86V81 257 aaKnown RBP19.24■□□□□ 0.67
MSH6-203ENST00000420813 CCDC83Q8IWF9 413 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 ERMNQ8TAM6 284 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 APOL6Q9BWW8 343 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 CACNA1HO95180 2353 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 TRIP11Q15643 1979 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 A0A087WWV3 80 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 LRRIQ4A6NIV6 560 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 SPDYE4A6NLX3 237 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 MUTP22033 750 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 GLUD2P49448 558 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 PTPN5P54829 565 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 HMGN5P82970 282 aaKnown RBP19.23■□□□□ 0.67
MSH6-203ENST00000420813 GRIK3Q13003 919 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 FAM187BQ17R55 369 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 ELMSAN1Q6PJG2 1045 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 ZBTB8OSQ8IWT0 167 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 GSTCDQ8NEC7 633 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 PRSS33Q8NF86 280 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 CMASQ8NFW8 434 aaPredicted RBP19.23■□□□□ 0.67
MSH6-203ENST00000420813 ZSCAN31Q96LW9 406 aaPredicted RBP19.23■□□□□ 0.67
MSH6-203ENST00000420813 COLEC11Q9BWP8 271 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 RXFP1Q9HBX9 757 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 GPRC5CQ9NQ84 441 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 DPP7Q9UHL4 492 aa19.23■□□□□ 0.67
MSH6-203ENST00000420813 DOCK8Q8NF50 2099 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 NPTXRO95502 500 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 C1RP00736 705 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 TRAPPC10P48553 1259 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 MRE11P49959 708 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 DSG1Q02413 1049 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 IER5LQ5T953 404 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 KIAA0319Q5VV43 1072 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 CCDC149Q6ZUS6 474 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 GPR65Q8IYL9 337 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 FBXO18Q8NFZ0 1043 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 ACSF2Q96CM8 615 aaPredicted RBP19.22■□□□□ 0.67
MSH6-203ENST00000420813 RHOBTB2Q9BYZ6 727 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 C2orf40Q9H1Z8 148 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 FZD8Q9H461 694 aa19.22■□□□□ 0.67
MSH6-203ENST00000420813 DAXXQ9UER7 740 aaPredicted RBP19.22■□□□□ 0.67
MSH6-203ENST00000420813 C2CD2LO14523 706 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 TEX28O15482 410 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 BRD1O95696 1058 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 CYP11B2P19099 503 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 AKAP5P24588 427 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 RBM25P49756 843 aaKnown RBP19.21■□□□□ 0.67
MSH6-203ENST00000420813 ZNF174Q15697 407 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 TTC38Q5R3I4 469 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 HAUS3Q68CZ6 603 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 POTEGQ6S5H5 508 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 CYP26C1Q6V0L0 522 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 MAEAQ7L5Y9 396 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 OTOP3Q7RTS5 596 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 TAS1R1Q7RTX1 841 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 CDR2LQ86X02 465 aaPredicted RBP19.21■□□□□ 0.67
MSH6-203ENST00000420813 MAN1C1Q9NR34 630 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 SH2B1Q9NRF2 756 aaPredicted RBP19.21■□□□□ 0.67
MSH6-203ENST00000420813 CHST7Q9NS84 486 aa19.21■□□□□ 0.67
MSH6-203ENST00000420813 ARHGEF35A5YM69 484 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 N4BP3O15049 544 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 GLUD1P00367 558 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 AVPR2P30518 371 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 NAMPTP43490 491 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 NUBP1P53384 320 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 VCPP55072 806 aaKnown RBP19.2■□□□□ 0.66
MSH6-203ENST00000420813 PADI6Q6TGC4 694 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 NOSTRINQ8IVI9 506 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 HDAC7Q8WUI4 952 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.2■□□□□ 0.66
MSH6-203ENST00000420813 PARP2Q9UGN5 583 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 LIMD1Q9UGP4 676 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 ADAM28Q9UKQ2 775 aa19.2■□□□□ 0.66
MSH6-203ENST00000420813 F8W810 466 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 ASGR2P07307 311 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 FXR2P51116 673 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■■■■■ 39.3
MSH6-203ENST00000420813 PPP2R5AQ15172 486 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 MAPK6Q16659 721 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 USP41Q3LFD5 358 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 FUT10Q6P4F1 479 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 FAM184AQ8NB25 1140 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 FEZF2Q8TBJ5 459 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 KLK14Q9P0G3 267 aa19.19■□□□□ 0.66
MSH6-203ENST00000420813 NOL7Q9UMY1 257 aaKnown RBP19.19■□□□□ 0.66
MSH6-203ENST00000420813 VWA8A3KMH1 1905 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 PAPLNO95428 1278 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 CREMQ03060 361 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 TCF15Q12870 199 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 TUSC3Q13454 348 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 PRPF4BQ13523 1007 aaKnown RBP19.18■□□□□ 0.66
MSH6-203ENST00000420813 GNL2Q13823 731 aaKnown RBP19.18■□□□□ 0.66
MSH6-203ENST00000420813 BSNDQ8WZ55 320 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 GPR62Q9BZJ7 368 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 CCDC113Q9H0I3 377 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 IRF2BPLQ9H1B7 796 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 PDZD7Q9H5P4 517 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 FNIP2Q9P278 1114 aa19.18■□□□□ 0.66
MSH6-203ENST00000420813 STK24Q9Y6E0 443 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms