RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 LLGL2Q6P1M3 1020 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 TMEM184AQ6ZMB5 413 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 GJD3Q8N144 294 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 SMRP1Q8NCR6 262 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 GSTCDQ8NEC7 633 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 AUTS2Q8WXX7 1259 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 VN1R3Q9BXE9 311 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 KLK14Q9P0G3 267 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 STK39Q9UEW8 545 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 ZMYM2Q9UBW7 1377 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 MYH11P35749 1972 aa17.22■□□□□ 0.35
ITGB1-204ENST00000417122 CUL9Q8IWT3 2517 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.21■□□□□ 0.35
ITGB1-204ENST00000417122 PLA2G4BP0C869 781 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 GUCY2CP25092 1073 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 LONP1P36776 959 aaKnown RBP17.21■□□□□ 0.35
ITGB1-204ENST00000417122 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 GRIN1Q05586 938 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 RAD51AP2Q09MP3 1159 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 RESTQ13127 1097 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 GIT2Q14161 759 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 NT5DC1Q5TFE4 455 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 EEF1DP3Q658K8 133 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 ADHFE1Q8IWW8 467 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 CALML4Q96GE6 196 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 RPS6KC1Q96S38 1066 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 TMEM134Q9H6X4 195 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 C17orf75Q9HAS0 396 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 KMT5AQ9NQR1 393 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 MARCH5Q9NX47 278 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 SNTG2Q9NY99 539 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 KCND2Q9NZV8 630 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 PRG3Q9Y2Y8 225 aaPredicted RBP17.21■□□□□ 0.35
ITGB1-204ENST00000417122 IRAK3Q9Y616 596 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 CLIC4Q9Y696 253 aa17.21■□□□□ 0.35
ITGB1-204ENST00000417122 PHLPP2Q6ZVD8 1323 aa17.21■□□□□ 0.34
ITGB1-204ENST00000417122 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 CLASP2O75122 1294 aaKnown RBP17.2■□□□□ 0.34
ITGB1-204ENST00000417122 NR1I2O75469 434 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 ZP2Q05996 745 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 GRIK3Q13003 919 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 DCAF4L1Q3SXM0 396 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 ANKRD54Q6NXT1 300 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 TMEM87AQ8NBN3 555 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 SNX21Q969T3 373 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 ARHGAP28Q9P2N2 729 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
ITGB1-204ENST00000417122 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
ITGB1-204ENST00000417122 HCFC2Q9Y5Z7 792 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 MUC3AQ02505 3323 aa17.2■□□□□ 0.34
ITGB1-204ENST00000417122 SLC16A4O15374 487 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 RECQL4O94761 1208 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 PTPAQ15257 358 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 FAM173BQ6P4H8 233 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 CASP10Q92851 521 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 COLEC11Q9BWP8 271 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 KCNG1Q9UIX4 513 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 MTMR6Q9Y217 621 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 TNFSF13BQ9Y275 285 aa17.19■□□□□ 0.34
ITGB1-204ENST00000417122 USP15Q9Y4E8 981 aaPredicted RBP17.19■□□□□ 0.34
ITGB1-204ENST00000417122 TTC28Q96AY4 2481 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 C19orf67A6NJJ6 358 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 STX6O43752 255 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 SOD2P04179 222 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 PLS3P13797 630 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 HOXB8P17481 243 aaPredicted RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 KARSQ15046 597 aaKnown RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 TAS1R3Q7RTX0 852 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 APBB1IPQ7Z5R6 666 aaPredicted RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 RASSF8Q8NHQ8 419 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 SPIRE2Q8WWL2 714 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.344e-6■■□□□ 14.1
ITGB1-204ENST00000417122 POP1Q99575 1024 aaKnown RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 ACO2Q99798 780 aaKnown RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 NTPCRQ9BSD7 190 aaKnown RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 MRPL4Q9BYD3 311 aaKnown RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
ITGB1-204ENST00000417122 GDAQ9Y2T3 454 aa17.18■□□□□ 0.34
ITGB1-204ENST00000417122 NPHP3-ACAD11A0A0J9YXS1 232 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 F8W810 466 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 PTGESO14684 152 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 THP07101 528 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 PLCG1P19174 1290 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 MARCKSP29966 332 aaPredicted RBP17.17■□□□□ 0.34
ITGB1-204ENST00000417122 SMTNP53814 917 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
ITGB1-204ENST00000417122 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
ITGB1-204ENST00000417122 DHX8Q14562 1220 aaKnown RBP17.17■□□□□ 0.34
ITGB1-204ENST00000417122 ARSHQ5FYA8 562 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 SYCE2Q6PIF2 218 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 HSCBQ8IWL3 235 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 LRRC15Q8TF66 581 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 HERC2P3Q9BVR0 1158 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 APOL5Q9BWW9 433 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 EMILIN2Q9BXX0 1053 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 CCSER1Q9C0I3 900 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 S1PR5Q9H228 398 aa17.17■□□□□ 0.34
ITGB1-204ENST00000417122 EPHX3Q9H6B9 360 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms