RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 DEFB128Q7Z7B8 93 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 SCFD1Q8WVM8 642 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 CCDC51Q96ER9 411 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 SRRTQ9BXP5 876 aaKnown RBP15.86■□□□□ 0.13
SGCE-202ENST00000415788 FGFBP2Q9BYJ0 223 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 ARGLU1Q9NWB6 273 aaPredicted RBP15.86■□□□□ 0.13
SGCE-202ENST00000415788 CAPN15O75808 1086 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 TPM1P09493 284 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 FGFR4P22455 802 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 STIM1Q13586 685 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 APBB1IPQ7Z5R6 666 aaPredicted RBP15.85■□□□□ 0.13
SGCE-202ENST00000415788 GUF1Q8N442 669 aaKnown RBP15.85■□□□□ 0.13
SGCE-202ENST00000415788 DBF4BQ8NFT6 615 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 BICD1Q96G01 975 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 PPP1R13BQ96KQ4 1090 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 OSBPL7Q9BZF2 842 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 IL23AQ9NPF7 189 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 PIN4Q9Y237 131 aaKnown RBP15.85■□□□□ 0.13
SGCE-202ENST00000415788 GDAQ9Y2T3 454 aa15.85■□□□□ 0.13
SGCE-202ENST00000415788 A0A1B0GUA9 196 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 BIN1O00499 593 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 HNRNPDLO14979 420 aaKnown RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 N4BP3O15049 544 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 ATP8B1O43520 1251 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 PRPF6O94906 941 aaKnown RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 ARF4P18085 180 aaPredicted RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 SNRPFP62306 86 aaKnown RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 TMEM132AQ24JP5 1023 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 ATF7IP2Q5U623 682 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 E4F1Q66K89 784 aaPredicted RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 SYCP3Q8IZU3 236 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 GLIS3Q8NEA6 775 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 TNFSF13BQ9Y275 285 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.84■□□□□ 0.13
SGCE-202ENST00000415788 MYH11P35749 1972 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 B4GALT5O43286 388 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 EFCAB14O75071 495 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 ACTN1P12814 892 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 HOXA11P31270 313 aaPredicted RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 LIG4P49917 911 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 KNOP1Q1ED39 458 aaKnown RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 PSRC1Q6PGN9 363 aaPredicted RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 ACO2Q99798 780 aaKnown RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 ADPGKQ9BRR6 497 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 TRAIPQ9BWF2 469 aa15.84■□□□□ 0.13
SGCE-202ENST00000415788 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.84■□□□□ 0.13
SGCE-202ENST00000415788 V9GYY5 206 aaPredicted RBP15.84■□□□□ 0.13
SGCE-202ENST00000415788 ABHD14A-ACY1A0A1B0GW23 586 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 TOM1L1O75674 476 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 IKBKEQ14164 716 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 SLFN12LQ6IEE8 588 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 MLKLQ8NB16 471 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 GOLGA5Q8TBA6 731 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 TARS2Q9BW92 718 aaKnown RBP15.83■□□□□ 0.12
SGCE-202ENST00000415788 GBP3Q9H0R5 595 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 TMX1Q9H3N1 280 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 C1orf112Q9NSG2 853 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 ZNF446Q9NWS9 450 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 DACH1Q9UI36 760 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 SIP14410 1827 aa15.83■□□□□ 0.12
SGCE-202ENST00000415788 PSMA7O14818 248 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 BAIAP3O94812 1187 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 BMP6P22004 513 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 PRCPP42785 496 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 NLRP12P59046 1061 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 KCNA1Q09470 495 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 DSC3Q14574 896 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 ISM2Q6H9L7 571 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 TWF2Q6IBS0 349 aaKnown RBP15.82■□□□□ 0.12
SGCE-202ENST00000415788 SLC27A1Q6PCB7 646 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 HS2ST1Q7LGA3 356 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 SMYD4Q8IYR2 804 aaPredicted RBP15.82■□□□□ 0.12
SGCE-202ENST00000415788 ADSSL1Q8N142 457 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 VWCEQ96DN2 955 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 TSPYL2Q9H2G4 693 aaPredicted RBP15.82■□□□□ 0.12
SGCE-202ENST00000415788 EDN1P05305 212 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 SKIP12755 728 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 PROZP22891 400 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 RAB27AP51159 221 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 MLLT1Q03111 559 aaPredicted RBP15.82■□□□□ 0.12
SGCE-202ENST00000415788 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
SGCE-202ENST00000415788 TEX35Q5T0J7 233 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 MPZL3Q6UWV2 235 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 NELFCDQ8IXH7 590 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 DHTKD1Q96HY7 919 aaPredicted RBP15.82■□□□□ 0.12
SGCE-202ENST00000415788 CPB2Q96IY4 423 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 ADAM2Q99965 735 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 TSPYL1Q9H0U9 437 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 PDZD7Q9H5P4 517 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 PTPRHQ9HD43 1115 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 RGS18Q9NS28 235 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
SGCE-202ENST00000415788 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 STYXL1Q9Y6J8 313 aa15.82■□□□□ 0.12
SGCE-202ENST00000415788 LTBP2Q14767 1821 aa15.81■□□□□ 0.12
SGCE-202ENST00000415788 TTLL13PA6NNM8 815 aa15.81■□□□□ 0.12
SGCE-202ENST00000415788 PDXKO00764 312 aa15.81■□□□□ 0.12
SGCE-202ENST00000415788 IKBKBO14920 756 aa15.81■□□□□ 0.12
SGCE-202ENST00000415788 CLDN3O15551 220 aa15.81■□□□□ 0.12
SGCE-202ENST00000415788 HOXD13P35453 343 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms