RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 VTNP04004 478 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 COL6A1P12109 1028 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 ABCD1P33897 745 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 TMEM62Q0P6H9 643 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 CAPSQ13938 189 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 GBP6Q6ZN66 633 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 REXO1L1PQ8IX06 675 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 METTL13Q8N6R0 699 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 XXYLT1Q8NBI6 393 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 SLC35C1Q96A29 364 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 CBWD1Q9BRT8 395 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 MINDY3Q9H8M7 445 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 CEP72Q9P209 647 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 NRCAMQ92823 1304 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 LRRIQ4A6NIV6 560 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 TUBB4AP04350 444 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 IQCF3P0C7M6 154 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 CYLC1P35663 651 aaPredicted RBP12.27□□□□□ -0.44
LINC00330-201ENST00000414562 CDK7P50613 346 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.44
LINC00330-201ENST00000414562 WDR59Q6PJI9 974 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 MAP4K3Q8IVH8 894 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 C7orf31Q8N865 590 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 DEPTORQ8TB45 409 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 DNAJB3Q8WWF6 145 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 BORCS6Q96GS4 357 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.44
LINC00330-201ENST00000414562 NLRC4Q9NPP4 1024 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 HSPBP1Q9NZL4 362 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 SUCLA2Q9P2R7 463 aaPredicted RBP12.27□□□□□ -0.44
LINC00330-201ENST00000414562 PPME1Q9Y570 386 aa12.27□□□□□ -0.44
LINC00330-201ENST00000414562 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.44
LINC00330-201ENST00000414562 ZEB2O60315 1214 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 IPO7O95373 1038 aaKnown RBP12.27□□□□□ -0.45
LINC00330-201ENST00000414562 EN2P19622 333 aaPredicted RBP12.27□□□□□ -0.45
LINC00330-201ENST00000414562 DMTNQ08495 405 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 LAMTOR4Q0VGL1 99 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 STRN3Q13033 797 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 MEA1Q16626 185 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 INTS8Q75QN2 995 aaKnown RBP12.27□□□□□ -0.45
LINC00330-201ENST00000414562 SESTD1Q86VW0 696 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 EXOC8Q8IYI6 725 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 ACRBPQ8NEB7 543 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 KIF18AQ8NI77 898 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 VTI1AQ96AJ9 217 aa12.27□□□□□ -0.45
LINC00330-201ENST00000414562 NUCKS1Q9H1E3 243 aaKnown RBP12.27□□□□□ -0.45
LINC00330-201ENST00000414562 C17orf102A2RUQ5 167 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 RRN3P2A6NIE6 340 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 LRRC53A6NM62 1247 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 HNRNPDLO14979 420 aaKnown RBP12.26□□□□□ -0.45
LINC00330-201ENST00000414562 B4GALT4O60513 344 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 NDUFA10O95299 355 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 CYP2C9P11712 490 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
LINC00330-201ENST00000414562 SLC20A2Q08357 652 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 BFSP1Q12934 665 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 TRIM71Q2Q1W2 868 aaKnown RBP12.26□□□□□ -0.45
LINC00330-201ENST00000414562 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 PRIMPOLQ96LW4 560 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 KATNAL1Q9BW62 490 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
LINC00330-201ENST00000414562 NHEJ1Q9H9Q4 299 aaPredicted RBP12.26□□□□□ -0.45
LINC00330-201ENST00000414562 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 STARD7Q9NQZ5 370 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 GCNT4Q9P109 453 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 PLAGL2Q9UPG8 496 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 PAXBP1Q9Y5B6 917 aa12.26□□□□□ -0.45
LINC00330-201ENST00000414562 GOLGA8IPA6NC78 632 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 GOLGA8JA6NMD2 632 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 KBTBD13C9JR72 458 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 ANKRD63C9JTQ0 380 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 GPR32O75388 356 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 NOL4O94818 638 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 ACTN1P12814 892 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 SLC9A1P19634 815 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 SCP2P22307 547 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 PON1P27169 355 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 NAMPTP43490 491 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 FMO5P49326 533 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 CDK17Q00537 523 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 SFMBT2Q5VUG0 894 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 IER5Q5VY09 327 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 SYT10Q6XYQ8 523 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 SERINC5Q86VE9 423 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 RHPN2Q8IUC4 686 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 TMEM40Q8WWA1 233 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 TCP11Q8WWU5 503 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 POMGNT1Q8WZA1 660 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 BAP1Q92560 729 aa12.25□□□□□ -0.45
LINC00330-201ENST00000414562 PAWRQ96IZ0 340 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms