RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 CHORDC1Q9UHD1 332 aaPredicted RBP9.57□□□□□ -0.88
SIK3-202ENST00000413553 DDX60LQ5H9U9 1706 aaKnown RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 PITPNM2Q9BZ72 1349 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 RSPH10B2B2RC85 870 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 LIN7AO14910 233 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 RAD21O60216 631 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 LINGO3P0C6S8 592 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 RSPH10BP0C881 870 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 HSPA6P17066 643 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 SMARCA1P28370 1054 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 HOXD13P35453 343 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 CTCFP49711 727 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 SLC12A3P55017 1021 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 PSMC6P62333 389 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 KCNA1Q09470 495 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 GIT2Q14161 759 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 MESDQ14696 234 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 DLGAP5Q15398 846 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 MFSD5Q6N075 450 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 RSBN1LQ6PCB5 846 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 VSTM1Q6UX27 236 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 CLEC10AQ8IUN9 316 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 ASTN1O14525 1302 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 ANKRD62A6NC57 917 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 TULP1O00294 542 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 TBCAO75347 108 aaKnown RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 AP1G2O75843 785 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 RAD23BP54727 409 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 TNIP1Q15025 636 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 RBBP5Q15291 538 aaKnown RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 ASRGL1Q7L266 308 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 FAM186BQ8IYM0 893 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 CKAP2Q8WWK9 683 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 PRMT6Q96LA8 375 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 ROPN1BQ9BZX4 212 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 IKZF4Q9H2S9 585 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 ROPN1Q9HAT0 212 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 NKX1-2Q9UD57 310 aaPredicted RBP9.56□□□□□ -0.88
SIK3-202ENST00000413553 PCYOX1Q9UHG3 505 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 MTUS1Q9ULD2 1270 aa9.56□□□□□ -0.88
SIK3-202ENST00000413553 TCRBV7S2A1N4TA0A589 114 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 MIF4GDA9UHW6 222 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 H0Y3Z8 333 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 NEFHP12036 1026 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 ATP4AP20648 1035 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 SLC16A2P36021 539 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 RNASELQ05823 741 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 CTTNQ14247 550 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 GNPTABQ3T906 1256 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 TNFAIP8L3Q5GJ75 292 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 SEPT14Q6ZU15 432 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 RHOT2Q8IXI1 618 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 LMNTD2Q8IXW0 634 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 TMEM237Q96Q45 408 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 POP1Q99575 1024 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 ZSWIM1Q9BR11 485 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 MRIQ9BWK5 157 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 MOV10L1Q9BXT6 1211 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 STK33Q9BYT3 514 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 BCAS3Q9H6U6 928 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 NKIRAS1Q9NYS0 192 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 CPSF2Q9P2I0 782 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 ASIC3Q9UHC3 531 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 DNM3Q9UQ16 869 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 CDK5RAP2Q96SN8 1893 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 CLRN2A0PK11 232 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 SFI1A8K8P3 1242 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 SLC16A3O15427 465 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 SMIM24O75264 130 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 UNC5CO95185 931 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 INHBEP58166 350 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 MXRA7P84157 204 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 CYP4A11Q02928 519 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 MGAT5Q09328 741 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 RRP1BQ14684 758 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 ASPRV1Q53RT3 343 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 SRRM1Q8IYB3 904 aaKnown RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 ZDHHC14Q8IZN3 488 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 ART4Q93070 314 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 SERPINB12Q96P63 405 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 TSC22D3Q99576 134 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 PSTPIP2Q9H939 334 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 TXLNGQ9NUQ3 528 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 ZMYND8Q9ULU4 1186 aaPredicted RBP9.55□□□□□ -0.88
SIK3-202ENST00000413553 SCN9AQ15858 1988 aa9.55□□□□□ -0.88
SIK3-202ENST00000413553 LRRD1A4D1F6 860 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 TCP10L2B9ZVM9 353 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L15C9J2P7 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L13C9JLJ4 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L11C9JVI0 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L18D6R9N7 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L22D6RA61 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L17D6RBQ6 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L19D6RCP7 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 USP17L20D6RJB6 530 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 SNUPNO95149 360 aaKnown RBP9.54□□□□□ -0.88
SIK3-202ENST00000413553 ECEL1O95672 775 aa9.54□□□□□ -0.88
SIK3-202ENST00000413553 TTLL1O95922 423 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms