RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 NOC3LQ8WTT2 800 aaKnown RBP12.69□□□□□ -0.38
HDAC9-206ENST00000413380 SLC39A7Q92504 469 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 HAPLN2Q9GZV7 340 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 THAP9Q9H5L6 903 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 TMEM39AQ9NV64 488 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 PADI3Q9ULW8 664 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 ST3GAL5Q9UNP4 418 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 GINS2Q9Y248 185 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 NFE2L3Q9Y4A8 694 aa12.69□□□□□ -0.38
HDAC9-206ENST00000413380 UMODL1Q5DID0 1318 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 TISP43B9A030 160 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 SLC16A3O15427 465 aaKnown RBP12.68□□□□□ -0.38
HDAC9-206ENST00000413380 CLDN3O15551 220 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 NBNO60934 754 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 TIMP1P01033 207 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 C7P10643 843 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 MCF2P10911 925 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 GHRP10912 638 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 NR2F2P24468 414 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
HDAC9-206ENST00000413380 STX17P56962 302 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 NCBP1Q09161 790 aaKnown RBP12.68□□□□□ -0.38
HDAC9-206ENST00000413380 PAK2Q13177 524 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 DSC3Q14574 896 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDAC9-206ENST00000413380 DCAF4L1Q3SXM0 396 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 IRF2BP1Q8IU81 584 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 CSGALNACT2Q8N6G5 542 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 BICD1Q96G01 975 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 CDT1Q9H211 546 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 HSPBP1Q9NZL4 362 aa12.68□□□□□ -0.38
HDAC9-206ENST00000413380 CEP290O15078 2479 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 TRIM43BA6NCK2 446 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 CETN3O15182 167 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 FGFR1OPO95684 399 aaKnown RBP12.67□□□□□ -0.38
HDAC9-206ENST00000413380 GNA14O95837 355 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 LDHAP00338 332 aaKnown RBP12.67□□□□□ -0.38
HDAC9-206ENST00000413380 FGFR4P22455 802 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 CD52P31358 61 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 ADAM9Q13443 819 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 KYAT1Q16773 422 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 UBXN11Q5T124 520 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 ARMCX5Q6P1M9 558 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 SLC27A1Q6PCB7 646 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 APBB1IPQ7Z5R6 666 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-206ENST00000413380 LUZP1Q86V48 1076 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 XXYLT1Q8NBI6 393 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 POMGNT1Q8WZA1 660 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 APBB2Q92870 758 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 TRIM43Q96BQ3 446 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-206ENST00000413380 VWCEQ96DN2 955 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 BORCS6Q96GS4 357 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 ZBTB45Q96K62 511 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-206ENST00000413380 HTATIP2Q9BUP3 242 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 FTHL17Q9BXU8 183 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 IFIH1Q9BYX4 1025 aaKnown RBP12.67□□□□□ -0.38
HDAC9-206ENST00000413380 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 TMX1Q9H3N1 280 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 KIAA1586Q9HCI6 787 aa12.67□□□□□ -0.38
HDAC9-206ENST00000413380 BECN2A8MW95 431 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 CLIC2O15247 247 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 OGTO15294 1046 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 EXTL3O43909 919 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 ZNF623O75123 536 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 AKAP3O75969 853 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 ADRB2P07550 413 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 CRELD2Q6UXH1 353 aaPredicted RBP12.66□□□□□ -0.38
HDAC9-206ENST00000413380 GPD1LQ8N335 351 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 CPB2Q96IY4 423 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 ADPGKQ9BRR6 497 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
HDAC9-206ENST00000413380 FANCLQ9NW38 375 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 AGO2Q9UKV8 859 aaKnown RBP12.66□□□□□ -0.38
HDAC9-206ENST00000413380 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
HDAC9-206ENST00000413380 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
HDAC9-206ENST00000413380 PTPRSQ13332 1948 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 LRRC10BA6NIK2 292 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 PFKMP08237 780 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 ITGB8P26012 769 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 EEF1GP26641 437 aaKnown RBP12.65□□□□□ -0.38
HDAC9-206ENST00000413380 CYP2C18P33260 490 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 PSMC2P35998 433 aaKnown RBP12.65□□□□□ -0.38
HDAC9-206ENST00000413380 GRM5P41594 1212 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 CASP4P49662 377 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 RAB27AP51159 221 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 SPAG1Q07617 926 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 UVSSAQ2YD98 709 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 MFSD5Q6N075 450 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 FAM114A1Q8IWE2 563 aa12.65□□□□□ -0.38
HDAC9-206ENST00000413380 TRIM59Q8IWR1 403 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms