RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 C8orf37Q96NL8 207 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 MEIS3Q99687 375 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 PPP1R12CQ9BZL4 782 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 WNT8AQ9H1J5 351 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 RNF41Q9H4P4 317 aaPredicted RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 SIAEQ9HAT2 523 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 AVENQ9NQS1 362 aaPredicted RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 MACROD2A1Z1Q3 448 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CAPN8A6NHC0 703 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 EXTL3O43909 919 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CHEK2O96017 543 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 ZFYP08048 801 aaPredicted RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 SLC3A2P08195 630 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 ATP1A3P13637 1013 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CSTF2P33240 577 aaKnown RBP eCLIP5.57□□□□□ -1.521e-6■■■□□ 19.1
HERC4-205ENST00000412272 CLK3P49761 638 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 CDK7P50613 346 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 ZNF569Q5MCW4 686 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 DENND2CQ68D51 928 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CACNA2D4Q7Z3S7 1137 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CPLX4Q7Z7G2 160 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 ILDR1Q86SU0 546 aaPredicted RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 TSEN2Q8NCE0 465 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 SPOCK2Q92563 424 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 TMA16Q96EY4 203 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 ATP6V1G3Q96LB4 118 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CENPKQ9BS16 269 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CCDC134Q9H6E4 229 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 PPANQ9NQ55 473 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 PCDHA7Q9UN72 937 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 STX8Q9UNK0 236 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 SCAF8Q9UPN6 1271 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 MON2Q7Z3U7 1717 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 C17orf113A0A1B0GUU1 675 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 LILRB3O75022 631 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 HSF2BPO75031 334 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 MFAP3LO75121 409 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 RUNX1T1Q06455 604 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 TRIM14Q14142 442 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 RCN2Q14257 317 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 DSC3Q14574 896 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 SF3B3Q15393 1217 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 TMEM266Q2M3C6 531 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 MTERF2Q49AM1 385 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 HSP90AA5PQ58FG0 334 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 RESP18Q5W5W9 173 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 TRPM8Q7Z2W7 1104 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 C8orf58Q8NAV2 365 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 LINC00301Q8NCQ3 95 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 ANGPTL6Q8NI99 470 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 SSH3Q8TE77 659 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 FBF1Q8TES7 1133 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 NUDT16Q96DE0 195 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 NTN4Q9HB63 628 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 FANCLQ9NW38 375 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 GID8Q9NWU2 228 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 DMGDHQ9UI17 866 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 RPL26L1Q9UNX3 145 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 RBMX2Q9Y388 322 aaKnown RBP5.57□□□□□ -1.52
HERC4-205ENST00000412272 ZMYM6O95789 1325 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 A0A1W2PP64 1363 aa5.57□□□□□ -1.52
HERC4-205ENST00000412272 CPLX1O14810 134 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 GREM1O60565 184 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 KLHL2O95198 593 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 S100BP04271 92 aaPredicted RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 DRD4P21917 467 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 BCAP31P51572 246 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 PEX3P56589 373 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CHRNEQ04844 493 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 GALNTL6Q49A17 601 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 FBXO43Q4G163 708 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CAVIN4Q5BKX8 364 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ASRGL1Q7L266 308 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ATG9AQ7Z3C6 839 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CNGA4Q8IV77 575 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 FAM89AQ96GI7 184 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 SECISBP2Q96T21 854 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 EPB41L1Q9H4G0 881 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 WDR6Q9NNW5 1121 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 GDF3Q9NR23 364 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 KCNN3Q9UGI6 736 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 TCEAL9Q9UHQ7 104 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 TRIM33Q9UPN9 1127 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 DOLKQ9UPQ8 538 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 INO80B-WBP1J3KQ70 363 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 IRS4O14654 1257 aaPredicted RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 ORC4O43929 436 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 PRMT3O60678 531 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 SERPINC1P01008 464 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 CHGBP05060 677 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 GSTM1P09488 218 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ICAM2P13598 275 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 PRKCIP41743 596 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 EIF2B2P49770 351 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 PLCD1P51178 756 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 NDUFA8P51970 172 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 ATP11AP98196 1134 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 KARSQ15046 597 aaKnown RBP5.56□□□□□ -1.52
HERC4-205ENST00000412272 KCNJ8Q15842 424 aa5.56□□□□□ -1.52
HERC4-205ENST00000412272 AGBL2Q5U5Z8 902 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms