RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 PRAMEP78395 509 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 P3H2Q8IVL5 708 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 CDC26Q8NHZ8 85 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 DCUN1D1Q96GG9 259 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KCND2Q9NZV8 630 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KCNJ14Q9UNX9 436 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ZNF711Q9Y462 761 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 A0A1W2PQC6 194 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 BMP10O95393 424 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KCNA2P16389 499 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SERPINH1P50454 418 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 CCNJLQ8IV13 435 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 BEST2Q8NFU1 509 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 DCPSQ96C86 337 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 EGFL8Q99944 293 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 XDHP47989 1333 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 UBN2Q6ZU65 1347 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 PVALEFA0A1B0GWK0 134 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SPDYE5A6NIY4 337 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 CHL1O00533 1208 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 TM9SF1O15321 606 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ACSL3O95573 720 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ABCB1P08183 1280 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SNAP25P60880 206 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 TFAMQ00059 246 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SPDYE7PQ495Y7 208 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 UNC13DQ70J99 1090 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 TGFBRAP1Q8WUH2 860 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ELAC2Q9BQ52 826 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 DYRK4Q9NR20 520 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 TMEM63CQ9P1W3 806 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ZFATQ9P243 1243 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 EVPLLA8MZ36 301 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 NDUFA8P51970 172 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KCNA1Q09470 495 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SNX17Q15036 470 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 PHKG1Q16816 387 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 OR6B2Q6IFH4 312 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SULF1Q8IWU6 871 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 PI4K2BQ8TCG2 481 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SCFD2Q8WU76 684 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 DCAF4Q8WV16 495 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SH3KBP1Q96B97 665 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ADAM22Q9P0K1 906 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 RHOBTB1O94844 696 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 AP1S2P56377 157 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 ZYXQ15942 572 aaKnown RBP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 RDH13Q8NBN7 331 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 SSH3Q8TE77 659 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 HPS3Q969F9 1004 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 DEPDC7Q96QD5 511 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 USP28Q96RU2 1077 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 TMEM161AQ9NX61 479 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 DNAJC12Q9UKB3 198 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 CDYLQ9Y232 598 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 ABCC4O15439 1325 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 INO80B-WBP1J3KQ70 363 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 WWP2O00308 870 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 PSMD14O00487 310 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 SLC16A3O15427 465 aaKnown RBP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 HUS1O60921 280 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 MMP1P03956 469 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 RBBP7Q16576 425 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 HIF1AQ16665 826 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 SZRD1Q7Z422 152 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 SPATA21Q7Z572 469 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 PHACTR3Q96KR7 559 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 RRAGDQ9NQL2 400 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 TRIM49P0CI25 452 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 TRIM49CP0CI26 452 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 ALAS1P13196 640 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 MARK3P27448 753 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 CRYMQ14894 314 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 BEND6Q5SZJ8 279 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 FAM182BQ5T319 152 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 KRT27Q7Z3Y8 459 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 FGD2Q7Z6J4 655 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 CYP4Z1Q86W10 505 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 TTLL11Q8NHH1 800 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 PSMA8Q8TAA3 256 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 CASP10Q92851 521 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 DBNDD2Q9BQY9 259 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 STAP2Q9UGK3 403 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 TBK1Q9UHD2 729 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 LGALS16A8MUM7 142 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 RALAP11233 206 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 HADHAP40939 763 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 GUCA1AP43080 201 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 RPS8P62241 208 aaKnown RBP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 FAM133AQ8N9E0 248 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 YIPF3Q9GZM5 350 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 YEATS2Q9ULM3 1422 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 EIF3HO15372 352 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 MEFVO15553 781 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-203ENST00000412145 VCAM1P19320 739 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 BTNL9Q6UXG8 535 aa7.78□□□□□ -1.16
PTPN3-203ENST00000412145 MSTO1Q9BUK6 570 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms