RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 EPB41L2O43491 1005 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 KNG1P01042 644 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 HRGP04196 525 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 C8AP07357 584 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 DDIT3P35638 169 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 CHKAP35790 457 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 ADCY8P40145 1251 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 CCT2P78371 535 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 KIF23Q02241 960 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 HYIQ5T013 277 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 TMEM200BQ69YZ2 307 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 TRMT10BQ6PF06 316 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 LILRA6Q6PI73 481 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 OTOP2Q7RTS6 562 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 OVCH2Q7RTZ1 564 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 MAATS1Q7Z4T9 603 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 GLB1L2Q8IW92 636 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 SUGP1Q8IWZ8 645 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 THEMISQ8N1K5 641 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 PPM1NQ8N819 430 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 SPATA5Q8NB90 893 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 PPP1R35Q8TAP8 253 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 DIS3LQ8TF46 1054 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 HPS3Q969F9 1004 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 TRIM63Q969Q1 353 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 DYDC2Q96IM9 177 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 PAWRQ96IZ0 340 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 EIF2AK1Q9BQI3 630 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 APOL5Q9BWW9 433 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 GTPBP4Q9BZE4 634 aaKnown RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 HAPLN2Q9GZV7 340 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 SAE1Q9UBE0 346 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 Q9UFV3 132 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 EVLQ9UI08 416 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-204ENST00000412061 LRCH1Q9Y2L9 728 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 IRAK3Q9Y616 596 aa5.42□□□□□ -1.54
BRCA1-204ENST00000412061 hCG_1642624A0A1W2PR95 340 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 PRSS47A8MTI9 375 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 SEC24DO94855 1032 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-204ENST00000412061 RHOBTB3O94955 611 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 POU2F2P09086 479 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 MAPK9P45984 424 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 POU5F1Q01860 360 aaKnown RBP5.41□□□□□ -1.54
BRCA1-204ENST00000412061 MALLQ13021 153 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 IFIT5Q13325 482 aaKnown RBP5.41□□□□□ -1.54
BRCA1-204ENST00000412061 SEMA5AQ13591 1074 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 MAN2A1Q16706 1144 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 UAP1L1Q3KQV9 507 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 MUM1L1Q5H9M0 696 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 PPP4R3AQ6IN85 833 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 MZT2AQ6P582 158 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 LMBR1LQ6UX01 489 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 BTNL9Q6UXG8 535 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 GAREM2Q75VX8 874 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 DRC7Q8IY82 874 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 TMEFF1Q8IYR6 380 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 CAMKK1Q8N5S9 505 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 NGDNQ8NEJ9 315 aaKnown RBP5.41□□□□□ -1.54
BRCA1-204ENST00000412061 DEPTORQ8TB45 409 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 MAP3K14Q99558 947 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 ARFGAP3Q9NP61 516 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.41□□□□□ -1.54
BRCA1-204ENST00000412061 RTEL1Q9NZ71 1219 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 POLHQ9Y253 713 aa5.41□□□□□ -1.54
BRCA1-204ENST00000412061 ETV2O00321 342 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-204ENST00000412061 PLA2G1BP04054 148 aaKnown RBP5.4□□□□□ -1.55
BRCA1-204ENST00000412061 GLDCP23378 1020 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-204ENST00000412061 ANTXR2P58335 489 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 FAM193AP78312 1265 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 BTKQ06187 659 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 ADRM1Q16186 407 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 CCDC93Q567U6 631 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 PRR31Q5SQ13 230 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 ICE2Q659A1 982 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 DARS2Q6PI48 645 aaKnown RBP5.4□□□□□ -1.55
BRCA1-204ENST00000412061 FNIP1Q8TF40 1166 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 ZCCHC14Q8WYQ9 949 aaKnown RBP5.4□□□□□ -1.55
BRCA1-204ENST00000412061 COA7Q96BR5 231 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 TBATAQ96M53 351 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 ADI1Q9BV57 179 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 OSBPL6Q9BZF3 934 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 WDR12Q9GZL7 423 aaKnown RBP5.4□□□□□ -1.55
BRCA1-204ENST00000412061 BHMT2Q9H2M3 363 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 PGAP2Q9UHJ9 254 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 MAGEL2Q9UJ55 1249 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 RABGAP1Q9Y3P9 1069 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 SLC4A7Q9Y6M7 1214 aa5.4□□□□□ -1.55
BRCA1-204ENST00000412061 A0A0A6YYK5 440 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 TLR5O60602 858 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 DTNBO60941 627 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 TUSC2O75896 110 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 FSBPO95073 299 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 ZNF28P17035 718 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 RPL13P26373 211 aaKnown RBP5.39□□□□□ -1.55
BRCA1-204ENST00000412061 POLD1P28340 1107 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 IL13P35225 146 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 COPB2P35606 906 aa5.39□□□□□ -1.55
BRCA1-204ENST00000412061 GRK6P43250 576 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms