RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ZBTB41Q5SVQ8 909 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 CATSPEREQ5SY80 951 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 THEMIS2Q5TEJ8 643 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 TBC1D1Q86TI0 1168 aaPredicted RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 C1QL4Q86Z23 238 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 LIX1LQ8IVB5 337 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 CCDC33Q8N5R6 958 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 NAT16Q8N8M0 369 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 UHMK1Q8TAS1 419 aaKnown RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 PIP4K2CQ8TBX8 421 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 HDAC2Q92769 488 aaKnown RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 RGMAQ96B86 450 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 ZBTB10Q96DT7 871 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 RMDN3Q96TC7 470 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 CD244Q9BZW8 370 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 POFUT1Q9H488 388 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 ATP6V0A4Q9HBG4 840 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 ALG13Q9NP73 1137 aaKnown RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 ITM2CQ9NQX7 267 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 TBC1D22BQ9NU19 505 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 KLHL14Q9P2G3 628 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 COA3Q9Y2R0 106 aaPredicted RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 TMEM98Q9Y2Y6 226 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 AFG3L2Q9Y4W6 797 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 ELL2O00472 640 aaPredicted RBP5.77□□□□□ -1.49
LSM5-205ENST00000409952 SLC16A6O15403 523 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 SRGAP3O43295 1099 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 ORC4O43929 436 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 FTLP02792 175 aaPredicted RBP5.77□□□□□ -1.49
LSM5-205ENST00000409952 VDRP11473 427 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 VEGFAP15692 232 aaPredicted RBP5.77□□□□□ -1.49
LSM5-205ENST00000409952 FPR2P25090 351 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 MAP2K6P52564 334 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 LGALS4P56470 323 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 MALLQ13021 153 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 PKN1Q16512 942 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 MPEG1Q2M385 716 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 CCDC184Q52MB2 194 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 CCDC157Q569K6 752 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 FAM133BQ5BKY9 247 aaKnown RBP5.77□□□□□ -1.49
LSM5-205ENST00000409952 ADGRF1Q5T601 910 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 TIGD7Q6NT04 549 aaPredicted RBP5.77□□□□□ -1.49
LSM5-205ENST00000409952 KLHDC10Q6PID8 442 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 SLC30A5Q8TAD4 765 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 NRG4Q8WWG1 115 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 HDAC10Q969S8 669 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 DDX11Q96FC9 970 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 ZNF287Q9HBT7 754 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 SLC6A20Q9NP91 592 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 GRHPRQ9UBQ7 328 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 NUB1Q9Y5A7 615 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 NUMBLQ9Y6R0 609 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 X6R8D5 127 aa5.77□□□□□ -1.49
LSM5-205ENST00000409952 ST20-MTHFSA0A0A6YYL1 179 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 KRIT1O00522 736 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 ABLIM1O14639 778 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 APOL1O14791 398 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 FOXP2O15409 715 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 PHGDHO43175 533 aaKnown RBP5.76□□□□□ -1.49
LSM5-205ENST00000409952 IRAK2O43187 625 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 BUB1BO60566 1050 aaPredicted RBP5.76□□□□□ -1.49
LSM5-205ENST00000409952 IL18RAPO95256 599 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 ELF1P32519 619 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 RAP1GAPP47736 663 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 ALDH9A1P49189 494 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 DLG4P78352 724 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 CYP4F8P98187 520 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 CDK17Q00537 523 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 TUSC3Q13454 348 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 DAG1Q14118 895 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 SPIDRQ14159 915 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 FGL2Q14314 439 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 ZACNQ401N2 412 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 LMBR1LQ6UX01 489 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 C4orf50Q6ZRC1 276 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 ZNF605Q86T29 641 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 OR8H2Q8N162 312 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 RNF152Q8N8N0 203 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 NUP43Q8NFH3 380 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 PLBD2Q8NHP8 589 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 RSAD2Q8WXG1 361 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 ANKS1AQ92625 1134 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 MTFMTQ96DP5 389 aaKnown RBP5.76□□□□□ -1.49
LSM5-205ENST00000409952 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 RSPH9Q9H1X1 276 aaPredicted RBP5.76□□□□□ -1.49
LSM5-205ENST00000409952 MAGEH1Q9H213 219 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 PRDM12Q9H4Q4 367 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 ZMAT3Q9HA38 289 aaKnown RBP5.76□□□□□ -1.49
LSM5-205ENST00000409952 RIC8AQ9NPQ8 531 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 MBD1Q9UIS9 605 aaPredicted RBP5.76□□□□□ -1.49
LSM5-205ENST00000409952 TMPRSS11EQ9UL52 423 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 OGDHLQ9ULD0 1010 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 CEP83Q9Y592 693 aa5.76□□□□□ -1.49
LSM5-205ENST00000409952 UBA6A0AVT1 1052 aaPredicted RBP5.75□□□□□ -1.49
LSM5-205ENST00000409952 GOLGA6L3A6NEY3 463 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 C22orf46C9J442 243 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 NFIBO00712 420 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 C4BPAP04003 597 aaKnown RBP5.75□□□□□ -1.49
LSM5-205ENST00000409952 MPOP05164 745 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 PARP1P09874 1014 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms