RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 KLC4Q9NSK0 619 aa16.31■□□□□ 0.2
LYSMD4-204ENST00000409796 HERC5Q9UII4 1024 aaKnown RBP16.31■□□□□ 0.2
LYSMD4-204ENST00000409796 TULP1O00294 542 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 PODXLO00592 558 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 RGS16O15492 202 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 CYP26A1O43174 497 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 MTA2O94776 668 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 GGPS1O95749 300 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 FGFR4P22455 802 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 MXI1P50539 228 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 DEFB132Q7Z7B7 95 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 ATXN2LQ8WWM7 1075 aaKnown RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 ZNF317Q96PQ6 595 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 MTRF1LQ9UGC7 380 aaKnown RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 ZBTB21Q9ULJ3 1066 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 COL2A1P02458 1487 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 GOLGA8IPA6NC78 632 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 GOLGA8JA6NMD2 632 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 ATP2C2O75185 946 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 MMEP08473 750 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 MAPTP10636 758 aaKnown RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 COILP38432 576 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 TBC1D10BQ4KMP7 808 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 KRT27Q7Z3Y8 459 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 SLC47A2Q86VL8 602 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 SLC13A5Q86YT5 568 aaPredicted RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 FAM71AQ8IYT1 594 aa16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 EPS8L3Q8TE67 593 aaKnown RBP16.3■□□□□ 0.2
LYSMD4-204ENST00000409796 C21orf2O43822 256 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 P4HBP07237 508 aaKnown RBP16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 ADRB2P07550 413 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 PLS3P13797 630 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 KCNJ1P48048 391 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 RARRES1P49788 294 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 FMO1Q01740 532 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 ALCAMQ13740 583 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 SIX1Q15475 284 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 ZNF564Q8TBZ8 553 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 ZKSCAN4Q969J2 545 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 NUP85Q9BW27 656 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 CNOT7Q9UIV1 285 aaKnown RBP16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 PTPN22Q9Y2R2 807 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 CLRN2A0PK11 232 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 SPOPO43791 374 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 RARAP10276 462 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 GZMAP12544 262 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 GBP1P32455 592 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 RASA3Q14644 834 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 CYP1B1Q16678 543 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 LACTB2Q53H82 288 aaPredicted RBP16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 CCT6BQ92526 530 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 COL20A1Q9P218 1284 aa16.29■□□□□ 0.2
LYSMD4-204ENST00000409796 TMEM150BA6NC51 233 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 DHX15O43143 795 aaKnown RBP16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 RIPK2O43353 540 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 SCP2P22307 547 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 SCTRP47872 440 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 MAP2K1Q02750 393 aaPredicted RBP16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 ADCY2Q08462 1091 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 C6orf118Q5T5N4 469 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 MORC4Q8TE76 937 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 TMEM174Q8WUU8 243 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 CCDC189A1A4V9 331 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 SLC16A4O15374 487 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 AGTP01019 485 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 CYP1A2P05177 515 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 SF3A3Q12874 501 aaKnown RBP eCLIP16.28■□□□□ 0.29e-7■■■■□ 24.7
LYSMD4-204ENST00000409796 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 ART4Q93070 314 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 ZNF653Q96CK0 615 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 GPRC5CQ9NQ84 441 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 HAUS2Q9NVX0 235 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 DBR1Q9UK59 544 aaKnown RBP16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 MTUS1Q9ULD2 1270 aa16.28■□□□□ 0.2
LYSMD4-204ENST00000409796 GTF2BQ00403 316 aa16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 LLGL1Q15334 1064 aa16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 TRMT1LQ7Z2T5 733 aaKnown RBP16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 FAM160B2Q86V87 743 aa16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 SHC3Q92529 594 aa16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 HVCN1Q96D96 273 aa16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 POP1Q99575 1024 aaKnown RBP16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 TMEM109Q9BVC6 243 aa16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 GLIS2Q9BZE0 524 aaPredicted RBP16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 MCM8Q9UJA3 840 aa16.27■□□□□ 0.2
LYSMD4-204ENST00000409796 RARGP13631 454 aa16.27■□□□□ 0.19
LYSMD4-204ENST00000409796 PEX3P56589 373 aa16.27■□□□□ 0.19
LYSMD4-204ENST00000409796 SPP2Q13103 211 aa16.27■□□□□ 0.19
LYSMD4-204ENST00000409796 SLMAPQ14BN4 828 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms