RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 EVA1CP58658 441 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 HPCAP84074 193 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CBX3Q13185 183 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 GRB10Q13322 594 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 RASGRF1Q13972 1273 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 PDK4Q16654 411 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 EXOC3L4Q17RC7 722 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 KCTD19Q17RG1 926 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 DSTYKQ6XUX3 929 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ACAD11Q709F0 780 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 SRRM1Q8IYB3 904 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 VPS52Q8N1B4 723 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 PRELID2Q8N945 189 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 SMYD1Q8NB12 490 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 WDR60Q8WVS4 1066 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 DDX12PQ92771 950 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 GPKOWQ92917 476 aaPredicted RBP eCLIP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CLMNQ96JQ2 1002 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 MIPEPQ99797 713 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 BRIP1Q9BX63 1249 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 C10orf71Q711Q0 1435 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 MAGEB6P1A0A0J9YX57 407 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 FAM196BA6NMK8 535 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 UBAP1LF5GYI3 381 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 EXOC3O60645 756 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 E2F6O75461 281 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ITIH2P19823 946 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CRABP2P29373 138 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 PSMD7P51665 324 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 DNAJC3Q13217 504 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 MPP3Q13368 585 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 RASA3Q14644 834 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 STAT4Q14765 748 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 NONOQ15233 471 aaKnown RBP eCLIP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 EDRF1Q3B7T1 1238 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 FAM26FQ5R3K3 315 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 C6orf163Q5TEZ5 329 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 NLRP9Q7RTR0 991 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 FRMD5Q7Z6J6 570 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CLNKQ7Z7G1 428 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 RHOT2Q8IXI1 618 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ALDH16A1Q8IZ83 802 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 MIGA1Q8NAN2 632 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ECSITQ9BQ95 431 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 PHACTR1Q9C0D0 580 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 TIMMDC1Q9NPL8 285 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 BMP2KQ9NSY1 1161 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 ETNK2Q9NVF9 386 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 SMG5Q9UPR3 1016 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 CHMP2BQ9UQN3 213 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 TNS3Q68CZ2 1445 aa6.23□□□□□ -1.41
R3HDM1-202ENST00000409478 PRPF4O43172 522 aaKnown RBP eCLIP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 THAP12O43422 761 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 LGR5O75473 907 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 GAS8O95995 478 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 HNRNPCP07910 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 TROVE2P10155 538 aaKnown RBP eCLIP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 PIM1P11309 404 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 FGFR2P21802 821 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 SERPINB3P29508 390 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 COILP38432 576 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 JAM2P57087 298 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 COASYQ13057 564 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF211Q13398 564 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 CYLC2Q14093 348 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 LRRC41Q15345 812 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 C11orf63Q6NUN7 778 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 NEK8Q86SG6 692 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 RSPH1Q8WYR4 309 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC97Q96F63 343 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 MPP4Q96JB8 637 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 OSGEPQ9NPF4 335 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 RASA4BC9J798 803 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 RASA4O43374 803 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 EIF4BP23588 611 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 STAT1P42224 750 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 FXR2P51116 673 aaKnown RBP eCLIP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 HADHBP55084 474 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 AP2B1P63010 937 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 KYNUQ16719 465 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 LETM2Q2VYF4 491 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 CFAP157Q5JU67 520 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 IZUMO2Q6UXV1 221 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 SYDE1Q6ZW31 735 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 MIGA2Q7L4E1 593 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 C12orf50Q8NA57 414 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 SLC30A5Q8TAD4 765 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 RBM46Q8TBY0 533 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 MORC4Q8TE76 937 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 SDR42E1Q8WUS8 393 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 SLCO2A1Q92959 643 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 DGCR14Q96DF8 476 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 FAM89AQ96GI7 184 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 DYDC2Q96IM9 177 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 NSL1Q96IY1 281 aa6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 DDX50Q9BQ39 737 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-202ENST00000409478 BARHL2Q9NY43 387 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms