RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 A0A1W2PRG0 241 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 CALUO43852 315 aaPredicted RBP16.58■□□□□ 0.25
LIMS2-205ENST00000409455 EDIL3O43854 480 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 HIP1RO75146 1068 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 CYP11B2P19099 503 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 RPS12P25398 132 aaKnown RBP16.58■□□□□ 0.25
LIMS2-205ENST00000409455 KNOP1Q1ED39 458 aaKnown RBP16.58■□□□□ 0.25
LIMS2-205ENST00000409455 UBAP2Q5T6F2 1119 aaKnown RBP16.58■□□□□ 0.25
LIMS2-205ENST00000409455 MICALL2Q8IY33 904 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 FITM2Q8N6M3 262 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 SPDYE1Q8NFV5 336 aaPredicted RBP16.58■□□□□ 0.25
LIMS2-205ENST00000409455 HAS1Q92839 578 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.25
LIMS2-205ENST00000409455 PNMA6FA0A0J9YX94 578 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 KLHL33A6NCF5 533 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 PPP1R11O60927 126 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-205ENST00000409455 VCAM1P19320 739 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 PTGIRP43119 386 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 GJB7Q6PEY0 223 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 OTUD6AQ7L8S5 288 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 SLC30A5Q8TAD4 765 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 PARD3BQ8TEW8 1205 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 GJA10Q969M2 543 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 KLHL14Q9P2G3 628 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 PCYOX1Q9UHG3 505 aa16.58■□□□□ 0.24
LIMS2-205ENST00000409455 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 CCNB1P14635 433 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 RASA3Q14644 834 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 FBF1Q8TES7 1133 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 DCAF4Q8WV16 495 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 ALG3Q92685 438 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 ARHGEF2Q92974 986 aaKnown RBP16.57■□□□□ 0.24
LIMS2-205ENST00000409455 ZBTB10Q96DT7 871 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 TMOD4Q9NZQ9 345 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 POTEB3A0JP26 581 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 A6NHS1 94 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 POTECB2RU33 542 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 AKAP3O75969 853 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 NDUFB10O96000 172 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 ABL2P42684 1182 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 ECE1P42892 770 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 CASP5P51878 434 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 INHBEP58166 350 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 MKRN3Q13064 507 aaKnown RBP16.57■□□□□ 0.24
LIMS2-205ENST00000409455 POTEBQ6S5H4 581 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 UBL4BQ8N7F7 174 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 SPON1Q9HCB6 807 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 TRIM33Q9UPN9 1127 aa16.57■□□□□ 0.24
LIMS2-205ENST00000409455 GTPBP10A4D1E9 387 aaKnown RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 TBC1D12O60347 775 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 LINGO3P0C6S8 592 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 NEFHP12036 1026 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 RPL13P26373 211 aaKnown RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 SOX5P35711 763 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 TBC1D10BQ4KMP7 808 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 TRIM68Q6AZZ1 485 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 CCDC137Q6PK04 289 aaKnown RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 CCDC25Q86WR0 208 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 GMCL1P1Q8NEA9 526 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 KCNV2Q8TDN2 545 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 ETNK1Q9HBU6 452 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 ASTN2O75129 1339 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 PDXKO00764 312 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 ZBTB5O15062 677 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 SLC16A3O15427 465 aaKnown RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 UNC5CO95185 931 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 LONRF1Q17RB8 773 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 TRMT10CQ7L0Y3 403 aaKnown RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 ANKRD42Q8N9B4 389 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 RNF217Q8TC41 542 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 SLC35C1Q96A29 364 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 KCNK9Q9NPC2 374 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 TXLNGQ9NUQ3 528 aa16.56■□□□□ 0.24
LIMS2-205ENST00000409455 CPSF2Q9P2I0 782 aaKnown RBP16.56■□□□□ 0.24
LIMS2-205ENST00000409455 MIF4GDA9UHW6 222 aaKnown RBP16.55■□□□□ 0.24
LIMS2-205ENST00000409455 SNUPNO95149 360 aaKnown RBP16.55■□□□□ 0.24
LIMS2-205ENST00000409455 FESP07332 822 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 RWDD2BP57060 319 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 PRELID2Q8N945 189 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 ACER1Q8TDN7 264 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 CKAP2Q8WWK9 683 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 RMDN2Q96LZ7 410 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 SERPINB12Q96P63 405 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 TGS1Q96RS0 853 aaKnown RBP16.55■□□□□ 0.24
LIMS2-205ENST00000409455 SEPT11Q9NVA2 429 aaKnown RBP16.55■□□□□ 0.24
LIMS2-205ENST00000409455 PRKAG3Q9UGI9 489 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 KCNG1Q9UIX4 513 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 ZBTB21Q9ULJ3 1066 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 PFASO15067 1338 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 ZNF541Q9H0D2 1346 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 HGSO14964 777 aaPredicted RBP16.55■□□□□ 0.24
LIMS2-205ENST00000409455 AHCYL1O43865 530 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 NR3C1P04150 777 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 ATP4AP20648 1035 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 CTCFP49711 727 aaPredicted RBP16.55■□□□□ 0.24
LIMS2-205ENST00000409455 CCDC15Q0P6D6 951 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 CALCOCO2Q13137 446 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms