RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 DUSP9Q99956 384 aaKnown RBP16.67■□□□□ 0.26
AP1S3-204ENST00000409375 SRRTQ9BXP5 876 aaKnown RBP16.67■□□□□ 0.26
AP1S3-204ENST00000409375 WNT8AQ9H1J5 351 aa16.67■□□□□ 0.26
AP1S3-204ENST00000409375 AGO3Q9H9G7 860 aaKnown RBP16.67■□□□□ 0.26
AP1S3-204ENST00000409375 MAPK13O15264 365 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 EXTL3O43909 919 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 CXCL10P02778 98 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 EDN1P05305 212 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 HARSP12081 509 aaKnown RBP16.66■□□□□ 0.26
AP1S3-204ENST00000409375 HOXA11P31270 313 aaPredicted RBP16.66■□□□□ 0.26
AP1S3-204ENST00000409375 IQCB1Q15051 598 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 CCDC40Q4G0X9 1142 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 PLEKHG4Q58EX7 1191 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 ZBTB33Q86T24 672 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
AP1S3-204ENST00000409375 C7orf61Q8IZ16 206 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 SCLYQ96I15 445 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 CBWD1Q9BRT8 395 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 CCDC94Q9BW85 323 aaPredicted RBP16.66■□□□□ 0.26
AP1S3-204ENST00000409375 CDT1Q9H211 546 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 METTL14Q9HCE5 456 aaKnown RBP16.66■□□□□ 0.26
AP1S3-204ENST00000409375 PTPRHQ9HD43 1115 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 NR2E3Q9Y5X4 410 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
AP1S3-204ENST00000409375 ALPK3Q96L96 1907 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 ZNF233A6NK53 670 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 TISP43B9A030 160 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 NBNO60934 754 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 NPTXRO95502 500 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 TPM2P07951 284 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 CLTAP09496 248 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 KRT13P13646 458 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
AP1S3-204ENST00000409375 EEF1GP26641 437 aaKnown RBP16.65■□□□□ 0.26
AP1S3-204ENST00000409375 ADSSP30520 456 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 POU5F1Q01860 360 aaKnown RBP16.65■□□□□ 0.26
AP1S3-204ENST00000409375 PPIGQ13427 754 aaKnown RBP eCLIP16.65■□□□□ 0.26
AP1S3-204ENST00000409375 MBTPS1Q14703 1052 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 EEF1DP3Q658K8 133 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 DHX40Q8IX18 779 aaKnown RBP16.65■□□□□ 0.26
AP1S3-204ENST00000409375 RNF214Q8ND24 703 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 DPF3Q92784 378 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 TRIM43Q96BQ3 446 aaPredicted RBP16.65■□□□□ 0.26
AP1S3-204ENST00000409375 ZBTB45Q96K62 511 aaPredicted RBP16.65■□□□□ 0.26
AP1S3-204ENST00000409375 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 C1orf112Q9NSG2 853 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 DMAC2Q9NW81 257 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 USP20Q9Y2K6 914 aa16.65■□□□□ 0.26
AP1S3-204ENST00000409375 TTLL13PA6NNM8 815 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 EFCAB14O75071 495 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 ACTN1P12814 892 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 YARSP54577 528 aaKnown RBP16.64■□□□□ 0.25
AP1S3-204ENST00000409375 SURF1Q15526 300 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 SNRNP35Q16560 246 aaKnown RBP16.64■□□□□ 0.25
AP1S3-204ENST00000409375 CNKSR3Q6P9H4 555 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 LRRC55Q6ZSA7 311 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 INTS8Q75QN2 995 aaKnown RBP16.64■□□□□ 0.25
AP1S3-204ENST00000409375 FAM186BQ8IYM0 893 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 THNSL1Q8IYQ7 743 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 DBF4BQ8NFT6 615 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 PGBD4Q96DM1 585 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 ADAM2Q99965 735 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 IKZF4Q9H2S9 585 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 FANCLQ9NW38 375 aa16.64■□□□□ 0.25
AP1S3-204ENST00000409375 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
AP1S3-204ENST00000409375 ABLIM1O14639 778 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 PRKCSHP14314 528 aaPredicted RBP16.63■□□□□ 0.25
AP1S3-204ENST00000409375 GRM5P41594 1212 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 FPGSQ05932 587 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 PPP2R3AQ06190 1150 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 IKBKEQ14164 716 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 DSC3Q14574 896 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 NCAPHQ15003 741 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 SLC24A5Q71RS6 500 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 FRMD5Q7Z6J6 570 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 DEFB128Q7Z7B8 93 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
AP1S3-204ENST00000409375 SAAL1Q96ER3 474 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 CNOT6LQ96LI5 555 aaKnown RBP16.63■□□□□ 0.25
AP1S3-204ENST00000409375 FBXL18Q96ME1 805 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 ACAP3Q96P50 834 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 LBHD1Q9BQE6 289 aaPredicted RBP16.63■□□□□ 0.25
AP1S3-204ENST00000409375 FAM213AQ9BRX8 229 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 RBSNQ9H1K0 784 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 RPF1Q9H9Y2 349 aaKnown RBP16.63■□□□□ 0.25
AP1S3-204ENST00000409375 RGS18Q9NS28 235 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 TOPORSQ9NS56 1045 aaPredicted RBP16.63■□□□□ 0.25
AP1S3-204ENST00000409375 FAM105AQ9NUU6 356 aa16.63■□□□□ 0.25
AP1S3-204ENST00000409375 STX10O60499 249 aa16.62■□□□□ 0.25
AP1S3-204ENST00000409375 AKAP3O75969 853 aa16.62■□□□□ 0.25
AP1S3-204ENST00000409375 IL18RAPO95256 599 aa16.62■□□□□ 0.25
AP1S3-204ENST00000409375 MTIF2P46199 727 aaKnown RBP16.62■□□□□ 0.25
AP1S3-204ENST00000409375 MARSP56192 900 aaKnown RBP16.62■□□□□ 0.25
AP1S3-204ENST00000409375 ENPEPQ07075 957 aa16.62■□□□□ 0.25
AP1S3-204ENST00000409375 UVSSAQ2YD98 709 aa16.62■□□□□ 0.25
AP1S3-204ENST00000409375 CDKAL1Q5VV42 579 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms