RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 TOPORSQ9NS56 1045 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 RBAKQ9NYW8 714 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 HSPBP1Q9NZL4 362 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 SUCLA2Q9P2R7 463 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF232Q9UNY5 417 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 UBE4BO95155 1302 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 TBX3O15119 743 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 NCK2O43639 380 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 SLC4A1P02730 911 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 CYP1A1P04798 512 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 PRKCBP05771 671 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 TRIM49P0CI25 452 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 TRIM49CP0CI26 452 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 PLS3P13797 630 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 HOXD10P28358 340 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 CIITAP33076 1130 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 CASP7P55210 303 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 NFX1Q12986 1120 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 DRAP1Q14919 205 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 CYP4A22Q5TCH4 519 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 GUF1Q8N442 669 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 RYBPQ8N488 228 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 RBM46Q8TBY0 533 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 DEPDC1BQ8WUY9 529 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ZKSCAN4Q969J2 545 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 TMEM143Q96AN5 459 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 MCUR1Q96AQ8 359 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 TIPINQ9BVW5 301 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 TEX13BQ9BXU2 312 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 DEFB129Q9H1M3 183 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 CNOT8Q9UFF9 292 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ADAMTS1Q9UHI8 967 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 EMSYQ7Z589 1322 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 DOCK2Q92608 1830 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 GRIN3BO60391 1043 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 FGGP02679 453 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 CALB1P05937 261 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 INHBAP08476 426 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 SMARCA1P28370 1054 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ADORA2BP29275 332 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 INPP5BP32019 993 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 SOX5P35711 763 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 STAT5BP51692 787 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 PPP4CP60510 307 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 GPC5P78333 572 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 MTF1Q14872 753 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ARL13BQ3SXY8 428 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 PLA2G4FQ68DD2 849 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 LMBRD2Q68DH5 695 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 KCTD16Q68DU8 428 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 KRT39Q6A163 491 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 NXNQ6DKJ4 435 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 RNF111Q6ZNA4 994 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 HAUS6Q7Z4H7 955 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 VSIG1Q86XK7 387 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 C10orf67Q8IYJ2 551 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ENGASEQ8NFI3 743 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF564Q8TBZ8 553 aaPredicted RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 RNF139Q8WU17 664 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ARHGEF2Q92974 986 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 CALR3Q96L12 384 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ZDHHC15Q96MV8 337 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 GCNAQ96QF7 691 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 MXRA8Q9BRK3 442 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ZMYND12Q9H0C1 365 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 KCNQ5Q9NR82 932 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ANAPC7Q9UJX3 599 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 AGO2Q9UKV8 859 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 ATP8A1Q9Y2Q0 1164 aa4.05□□□□□ -1.76
RGPD4-201ENST00000408999 REXO2Q9Y3B8 237 aaKnown RBP4.05□□□□□ -1.76
RGPD4-201ENST00000408999 SALL1Q9NSC2 1324 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PIEZO2Q9H5I5 2752 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PHLPP1O60346 1717 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CASZ1Q86V15 1759 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PFDN6O15212 129 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SLC37A4O43826 429 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 HUS1O60921 280 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 RNF40O75150 1001 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CELF2O95319 508 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 S100BP04271 92 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SRGNP10124 158 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 KYAT1Q16773 422 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 RWDD4Q6NW29 188 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 C4orf50Q6ZRC1 276 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 RAPH1Q70E73 1250 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 DEFB132Q7Z7B7 95 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 GMCL1P1Q8NEA9 526 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 GTF3C2Q8WUA4 911 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 MOV10L1Q9BXT6 1211 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 MED4Q9NPJ6 270 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SMYD2Q9NRG4 433 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 INIPQ9NRY2 104 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 FAM217BQ9NTX9 383 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ADAM22Q9P0K1 906 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 RNF14Q9UBS8 474 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ZMYND8Q9ULU4 1186 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SPDYE2BA6NHP3 402 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 MYMKA6NI61 221 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PDXKO00764 312 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TNPO2O14787 897 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms