RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ZNF233A6NK53 670 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 HNRNPCL1O60812 293 aaKnown RBP6.24□□□□□ -1.41
HDAC9-203ENST00000406072 FMNL1O95466 1100 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-203ENST00000406072 CLPTM1O96005 669 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 LDHCP07864 332 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 PYGBP11216 843 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 NCF2P19878 526 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-203ENST00000406072 PAX3P23760 479 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 LONP1P36776 959 aaKnown RBP6.24□□□□□ -1.41
HDAC9-203ENST00000406072 BCAMP50895 628 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 NEK2P51955 445 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 PDE1BQ01064 536 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 GRIK3Q13003 919 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 DCTN2Q13561 401 aaKnown RBP6.24□□□□□ -1.41
HDAC9-203ENST00000406072 PPP2R5BQ15173 497 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 LRRC41Q15345 812 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 NXNQ6DKJ4 435 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 IZUMO2Q6UXV1 221 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 TRIM50Q86XT4 487 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 CCDC138Q96M89 665 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 TRAPPC9Q96Q05 1148 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 NPHS2Q9NP85 383 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 CLIC5Q9NZA1 410 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 EPS15L1Q9UBC2 864 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 ZNF229Q9UJW7 825 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 AGTPBP1Q9UPW5 1226 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 TAF6LQ9Y6J9 622 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 CAPN6Q9Y6Q1 641 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 ZNF532Q9HCE3 1301 aa6.24□□□□□ -1.41
HDAC9-203ENST00000406072 B2RBV5 119 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 LIN7AO14910 233 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 XPO1O14980 1071 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ASAP2O43150 1006 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 FAM13AO94988 1023 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 STAT2P52630 851 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 FKBP3Q00688 224 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 DNAJC3Q13217 504 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 TRIM16LQ309B1 348 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 EIF2AQ9BY44 585 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CELF4Q9BZC1 486 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 OSBPL7Q9BZF2 842 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ARMT1Q9H993 441 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 PARVBQ9HBI1 364 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 DOCK1Q14185 1865 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 INHBAP08476 426 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 KRT5P13647 590 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ATP6V1C1P21283 382 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 TECP42680 631 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CPA2P48052 419 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 SGMS1Q86VZ5 419 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 NRBF2Q96F24 287 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ABHD8Q96I13 439 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 GMLQ99445 158 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ADAM33Q9BZ11 813 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 PUS7LQ9H0K6 701 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ALG13Q9NP73 1137 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 IL1RAPL1Q9NZN1 696 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ZNF180Q9UJW8 692 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CCPG1Q9ULG6 757 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 TMCO1Q9UM00 188 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 SH3GLB1Q9Y371 365 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 SFI1A8K8P3 1242 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 GSG1L2A8MUP6 293 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 PDE2AO00408 941 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ENO1P06733 434 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 BCRP11274 1271 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 PLS3P13797 630 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 RPS12P25398 132 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 PTDSS1P48651 473 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 PMS1P54277 932 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 MAP3K10Q02779 954 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 AP1B1Q10567 949 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 MPP3Q13368 585 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 USP49Q70CQ1 688 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 TTLL6Q8N841 843 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CCDC89Q8N998 374 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ZNF579Q8NAF0 562 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 RDH13Q8NBN7 331 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 HELBQ8NG08 1087 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 TMEM237Q96Q45 408 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CCT7Q99832 543 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 IDI2Q9BXS1 227 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CRNKL1Q9BZJ0 848 aaKnown RBP6.23□□□□□ -1.41
HDAC9-203ENST00000406072 C10orf88Q9H8K7 445 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 RXFP1Q9HBX9 757 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 GIMAP4Q9NUV9 329 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 GID8Q9NWU2 228 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 STK36Q9NRP7 1315 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 RSPH10B2B2RC85 870 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 STRNO43815 780 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 ESRRBO95718 433 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CCDC159P0C7I6 412 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 RSPH10BP0C881 870 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 VCAM1P19320 739 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 YY1P25490 414 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 CDC27P30260 824 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 USP46P62068 366 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 TMPRSS15P98073 1019 aa6.23□□□□□ -1.41
HDAC9-203ENST00000406072 KCNMA1Q12791 1236 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms