RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 CLEC10AQ8IUN9 316 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 CD302Q8IX05 232 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 ERVK-9P63128 1117 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 ERVK-24P63145 666 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 EXOSC10Q01780 885 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 CCDC15Q0P6D6 951 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 KCTD6Q8NC69 237 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 VAMP7P51809 220 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 TAF2Q6P1X5 1199 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 MAGED2Q9UNF1 606 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 KIF20BQ96Q89 1820 aa12.53□□□□□ -0.4
RAPGEF3-204ENST00000405493 MCF2LO15068 1137 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 AMHP03971 560 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 TRIP13Q15645 432 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 AP1ARQ63HQ0 302 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 SDE2Q6IQ49 451 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 DHX40Q8IX18 779 aaKnown RBP12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 LRRC8CQ8TDW0 803 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 PBKQ96KB5 322 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 KCNH7Q9NS40 1196 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 INHBAP08476 426 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 ATP2C1P98194 919 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 ZMYND12Q9H0C1 365 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 MSRAQ9UJ68 235 aa12.52□□□□□ -0.4
RAPGEF3-204ENST00000405493 TADA3O75528 432 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 RAB27AP51159 221 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 VGLL4Q14135 290 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 EMBQ6PCB8 327 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 AP1M1Q9BXS5 423 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 NUF2Q9BZD4 464 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 ASNSD1Q9NWL6 643 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 TUBE1Q9UJT0 475 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 NEMP1O14524 444 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 ALDH1A3P47895 512 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 ST8SIA6P61647 398 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 TRIM72Q6ZMU5 477 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 PARD3BQ8TEW8 1205 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 LRG1P02750 347 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 PLS3P13797 630 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 PEX19P40855 299 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 OR1G1P47890 313 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 MUM1Q2TAK8 710 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 TAF1DQ9H5J8 278 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 SMYD2Q9NRG4 433 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.41
RAPGEF3-204ENST00000405493 TBC1D12O60347 775 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 GSTA1P08263 222 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 RPSAP08865 295 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 GSTA2P09210 222 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 ACTR2P61160 394 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 AMPD2Q01433 879 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 TRIM68Q6AZZ1 485 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 NR1D1P20393 614 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 IFNAR2P48551 515 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 MAP7Q14244 749 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 TMED2Q15363 201 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 METTL7BQ6UX53 244 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 SKA2Q8WVK7 121 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 P2RX7Q99572 595 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 EPC1Q9H2F5 836 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 UBE4BO95155 1302 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 FRMD3A2A2Y4 597 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 HSPA6P17066 643 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 PTPRAP18433 802 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 GUF1Q8N442 669 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 CCHCR1Q8TD31 782 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 SPATS2LQ9NUQ6 558 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 MROH7Q68CQ1 1323 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 SH2D4BQ5SQS7 431 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 ATF7IP2Q5U623 682 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 RAPH1Q70E73 1250 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 INTS9Q9NV88 658 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
RAPGEF3-204ENST00000405493 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CCZ1BP86790 482 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CCZ1P86791 482 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 NR1H3Q13133 447 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
RAPGEF3-204ENST00000405493 TMEM199Q8N511 208 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms